Information for 7-AATTCAAATTCAGCAG (Motif 17)

C G T A C G T A A C G T A C G T G T A C C G T A C G T A G T C A A C G T A C G T A T G C C G T A A C T G A G T C G T C A C T A G
Reverse Opposite:
A G T C A C G T A C T G A G T C A C G T A T C G C G T A G T C A A C G T A C G T A C G T A C T G C G T A C G T A A C G T G C A T
p-value:1e-7
log p-value:-1.671e+01
Information Content per bp:1.918
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.4 +/- 28.2bp
Average Position of motif in Background38.9 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AATTCAAATTCAGCAG
NATTCAAAT-------
 C G T A C G T A A C G T A C G T G T A C C G T A C G T A G T C A A C G T A C G T A T G C C G T A A C T G A G T C G T C A C T A G
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AATTCAAATTCAGCAG---
----CTGAGTCAGCAATTT
 C G T A C G T A A C G T A C G T G T A C C G T A C G T A G T C A A C G T A C G T A T G C C G T A A C T G A G T C G T C A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

MAFF/MA0495.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AATTCAAATTCAGCAG-----
---GCTGAGTCAGCAATTTTT
 C G T A C G T A A C G T A C G T G T A C C G T A C G T A G T C A A C G T A C G T A T G C C G T A A C T G A G T C G T C A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AATTCAAATTCAGCAG----
-----HWWGTCAGCAWWTTT
 C G T A C G T A A C G T A C G T G T A C C G T A C G T A G T C A A C G T A C G T A T G C C G T A A C T G A G T C G T C A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AATTCAAATTCAGCAG
ATATGCAAATNNN----
 A C G T C G T A C G T A A C G T A C G T G T A C C G T A C G T A G T C A A C G T A C G T A T G C C G T A A C T G A G T C G T C A C T A G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:AATTCAAATTCAGCAG---
--------GTCAGCANNTN
 C G T A C G T A A C G T A C G T G T A C C G T A C G T A G T C A A C G T A C G T A T G C C G T A A C T G A G T C G T C A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AATTCAAATTCAGCAG
-----TGAGTCAGCA-
 C G T A C G T A A C G T A C G T G T A C C G T A C G T A G T C A A C G T A C G T A T G C C G T A A C T G A G T C G T C A C T A G
A C G T A C G T A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AATTCAAATTCAGCAG
AAGTTCAAGGTCAGC--
 A C G T C G T A C G T A A C G T A C G T G T A C C G T A C G T A G T C A A C G T A C G T A T G C C G T A A C T G A G T C G T C A C T A G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:AATTCAAATTCAGCAG---
-------NGTCAGCANTTT
 C G T A C G T A A C G T A C G T G T A C C G T A C G T A G T C A A C G T A C G T A T G C C G T A A C T G A G T C G T C A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AATTCAAATTCAGCAG
CGGTTTCAAA--------
 A C G T A C G T C G T A C G T A A C G T A C G T G T A C C G T A C G T A G T C A A C G T A C G T A T G C C G T A A C T G A G T C G T C A C T A G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T