Information for 9-TCAGAAWGAGAMA (Motif 11)

G C A T A T G C C G T A C T A G T C G A C T G A C G T A T A C G C G T A T C A G C G T A T G A C C T G A
Reverse Opposite:
A G C T A C T G G C A T A G T C C G A T A T G C G C A T A G C T A G C T G A T C C G A T A T C G C G T A
p-value:1e-10
log p-value:-2.406e+01
Information Content per bp:1.593
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif7.27%
Number of Background Sequences with motif1304.5
Percentage of Background Sequences with motif2.75%
Average Position of motif in Targets46.4 +/- 25.6bp
Average Position of motif in Background49.1 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TCAGAAWGAGAMA--
---GAAAGTGAAAGT
 G C A T A T G C C G T A C T A G T C G A C T G A C G T A T A C G C G T A T C A G C G T A T G A C C T G A A C G T A C G T
A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TCAGAAWGAGAMA--
---GAAACTGAAACT
 G C A T A T G C C G T A C T A G T C G A C T G A C G T A T A C G C G T A T C A G C G T A T G A C C T G A A C G T A C G T
A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCAGAAWGAGAMA--
---GRAASTGAAAST
 G C A T A T G C C G T A C T A G T C G A C T G A C G T A T A C G C G T A T C A G C G T A T G A C C T G A A C G T A C G T
A C G T A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF1/MA0050.2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCAGAAWGAGAMA------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T G C A T A T G C C G T A C T A G T C G A C T G A C G T A T A C G C G T A T C A G C G T A T G A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCAGAAWGAGAMA--
---GAAASYGAAASY
 G C A T A T G C C G T A C T A G T C G A C T G A C G T A T A C G C G T A T C A G C G T A T G A C C T G A A C G T A C G T
A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCAGAAWGAGAMA--
---GAAAMTGAAACT
 G C A T A T G C C G T A C T A G T C G A C T G A C G T A T A C G C G T A T C A G C G T A T G A C C T G A A C G T A C G T
A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

PRDM1/MA0508.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCAGAAWGAGAMA----
--AGAAAGTGAAAGTGA
 G C A T A T G C C G T A C T A G T C G A C T G A C G T A T A C G C G T A T C A G C G T A T G A C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCAGAAWGAGAMA--
---GGAAGTGAAAST
 G C A T A T G C C G T A C T A G T C G A C T G A C G T A T A C G C G T A T C A G C G T A T G A C C T G A A C G T A C G T
A C G T A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCAGAAWGAGAMA----
--GGAAANTGAAACTNA
 G C A T A T G C C G T A C T A G T C G A C T G A C G T A T A C G C G T A T C A G C G T A T G A C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCAGAAWGAGAMA-
--CGGAAGTGAAAC
 G C A T A T G C C G T A C T A G T C G A C T G A C G T A T A C G C G T A T C A G C G T A T G A C C T G A A C G T
A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C