Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 793)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 47801)	% of Background Sequences with Motif
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-32	-7.515e+01	0.0000	105.0	13.24%	1558.3	3.26%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-32	-7.443e+01	0.0000	95.0	11.98%	1291.8	2.70%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-32	-7.420e+01	0.0000	95.0	11.98%	1295.5	2.71%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-31	-7.204e+01	0.0000	110.0	13.87%	1768.6	3.70%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-30	-7.121e+01	0.0000	86.0	10.84%	1104.6	2.31%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-29	-6.830e+01	0.0000	100.0	12.61%	1546.8	3.24%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-29	-6.785e+01	0.0000	69.0	8.70%	733.3	1.53%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-25	-5.908e+01	0.0000	55.0	6.94%	526.6	1.10%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-20	-4.687e+01	0.0000	100.0	12.61%	2071.6	4.34%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-17	-4.096e+01	0.0000	114.0	14.38%	2789.3	5.84%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e-16	-3.824e+01	0.0000	41.0	5.17%	468.4	0.98%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-16	-3.817e+01	0.0000	85.0	10.72%	1810.5	3.79%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e-16	-3.707e+01	0.0000	31.0	3.91%	263.6	0.55%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-15	-3.634e+01	0.0000	96.0	12.11%	2275.4	4.76%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-14	-3.424e+01	0.0000	122.0	15.38%	3398.6	7.11%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-14	-3.308e+01	0.0000	80.0	10.09%	1797.1	3.76%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-14	-3.297e+01	0.0000	35.0	4.41%	398.6	0.83%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-13	-3.187e+01	0.0000	80.0	10.09%	1839.1	3.85%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e-13	-3.174e+01	0.0000	48.0	6.05%	768.6	1.61%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-13	-3.147e+01	0.0000	71.0	8.95%	1527.8	3.20%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-13	-3.109e+01	0.0000	74.0	9.33%	1647.5	3.45%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-13	-3.089e+01	0.0000	36.0	4.54%	453.1	0.95%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-13	-3.064e+01	0.0000	72.0	9.08%	1590.9	3.33%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-13	-3.020e+01	0.0000	69.0	8.70%	1497.7	3.13%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e-12	-2.948e+01	0.0000	53.0	6.68%	975.5	2.04%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e-11	-2.745e+01	0.0000	46.0	5.80%	804.2	1.68%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-11	-2.714e+01	0.0000	91.0	11.48%	2456.5	5.14%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e-11	-2.682e+01	0.0000	57.0	7.19%	1183.1	2.48%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-11	-2.637e+01	0.0000	49.0	6.18%	927.1	1.94%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-11	-2.589e+01	0.0000	97.0	12.23%	2763.8	5.78%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e-10	-2.400e+01	0.0000	23.0	2.90%	238.1	0.50%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-9	-2.289e+01	0.0000	100.0	12.61%	3051.8	6.39%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-9	-2.261e+01	0.0000	29.0	3.66%	408.8	0.86%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-8	-1.898e+01	0.0000	40.0	5.04%	837.3	1.75%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-7	-1.797e+01	0.0000	57.0	7.19%	1509.8	3.16%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e-7	-1.739e+01	0.0000	51.0	6.43%	1299.6	2.72%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-7	-1.699e+01	0.0000	30.0	3.78%	560.9	1.17%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e-7	-1.636e+01	0.0000	23.0	2.90%	360.1	0.75%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-6	-1.583e+01	0.0000	40.0	5.04%	944.3	1.98%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-6	-1.415e+01	0.0000	15.0	1.89%	184.0	0.39%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e-5	-1.379e+01	0.0000	17.0	2.14%	241.2	0.50%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-5	-1.335e+01	0.0000	41.0	5.17%	1084.0	2.27%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-5	-1.321e+01	0.0000	11.0	1.39%	103.5	0.22%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-5	-1.288e+01	0.0000	10.0	1.26%	86.1	0.18%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e-5	-1.189e+01	0.0001	19.0	2.40%	340.2	0.71%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e-5	-1.178e+01	0.0001	12.0	1.51%	144.3	0.30%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-4	-1.122e+01	0.0001	25.0	3.15%	562.2	1.18%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-4	-1.040e+01	0.0002	10.0	1.26%	115.8	0.24%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-4	-1.039e+01	0.0002	38.0	4.79%	1105.9	2.31%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-4	-9.763e+00	0.0004	37.0	4.67%	1098.0	2.30%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-4	-9.659e+00	0.0005	30.0	3.78%	815.3	1.71%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-4	-9.543e+00	0.0005	44.0	5.55%	1411.1	2.95%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-4	-9.518e+00	0.0005	10.0	1.26%	128.2	0.27%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e-4	-9.269e+00	0.0006	10.0	1.26%	132.3	0.28%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-4	-9.260e+00	0.0006	50.0	6.31%	1698.8	3.56%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-3	-9.080e+00	0.0007	56.0	7.06%	1987.0	4.16%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e-3	-8.867e+00	0.0009	49.0	6.18%	1681.7	3.52%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e-3	-8.718e+00	0.0010	29.0	3.66%	820.9	1.72%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-3	-7.720e+00	0.0027	57.0	7.19%	2149.4	4.50%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-3	-7.715e+00	0.0027	8.0	1.01%	106.0	0.22%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-3	-7.407e+00	0.0036	13.0	1.64%	264.4	0.55%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-2	-6.565e+00	0.0083	67.0	8.45%	2758.7	5.77%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-2	-6.547e+00	0.0083	243.0	30.64%	12359.4	25.87%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-2	-5.532e+00	0.0225	24.0	3.03%	788.3	1.65%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e-2	-5.361e+00	0.0263	44.0	5.55%	1744.9	3.65%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-2	-5.041e+00	0.0357	27.0	3.40%	959.1	2.01%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e-2	-4.981e+00	0.0373	49.0	6.18%	2034.8	4.26%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-2	-4.610e+00	0.0533	19.0	2.40%	626.8	1.31%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-1	-4.491e+00	0.0591	74.0	9.33%	3398.3	7.11%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e-1	-4.464e+00	0.0599	18.0	2.27%	591.7	1.24%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e-1	-4.311e+00	0.0688	18.0	2.27%	601.7	1.26%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e-1	-4.249e+00	0.0722	23.0	2.90%	835.2	1.75%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-1	-4.202e+00	0.0746	36.0	4.54%	1470.6	3.08%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e-1	-4.175e+00	0.0756	8.0	1.01%	190.9	0.40%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e-1	-4.166e+00	0.0756	20.0	2.52%	702.3	1.47%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-1	-4.157e+00	0.0756	89.0	11.22%	4262.9	8.92%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e-1	-4.039e+00	0.0833	11.0	1.39%	314.7	0.66%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-1	-3.941e+00	0.0906	129.0	16.27%	6516.2	13.64%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e-1	-3.904e+00	0.0929	2.0	0.25%	13.2	0.03%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-1	-3.736e+00	0.1085	62.0	7.82%	2882.0	6.03%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e-1	-3.643e+00	0.1176	26.0	3.28%	1033.6	2.16%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-1	-3.533e+00	0.1297	72.0	9.08%	3455.5	7.23%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e-1	-3.383e+00	0.1488	14.0	1.77%	483.2	1.01%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e-1	-3.357e+00	0.1510	6.0	0.76%	144.8	0.30%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-1	-3.342e+00	0.1515	36.0	4.54%	1572.1	3.29%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e-1	-3.324e+00	0.1524	17.0	2.14%	627.3	1.31%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-1	-3.320e+00	0.1524	130.0	16.39%	6726.2	14.08%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-1	-3.178e+00	0.1723	17.0	2.14%	639.8	1.34%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-1	-3.106e+00	0.1832	14.0	1.77%	503.2	1.05%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-1	-3.032e+00	0.1950	27.0	3.40%	1149.7	2.41%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-1	-3.030e+00	0.1950	15.0	1.89%	556.3	1.16%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-1	-2.971e+00	0.2029	50.0	6.31%	2368.0	4.96%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e-1	-2.929e+00	0.2093	11.0	1.39%	377.6	0.79%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-1	-2.886e+00	0.2161	48.0	6.05%	2274.1	4.76%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-1	-2.823e+00	0.2276	5.0	0.63%	125.9	0.26%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e-1	-2.808e+00	0.2287	45.0	5.67%	2127.0	4.45%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e-1	-2.779e+00	0.2331	15.0	1.89%	577.0	1.21%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e-1	-2.768e+00	0.2331	11.0	1.39%	388.1	0.81%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e-1	-2.767e+00	0.2331	29.0	3.66%	1285.4	2.69%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e-1	-2.733e+00	0.2367	7.0	0.88%	211.2	0.44%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e-1	-2.725e+00	0.2367	2.0	0.25%	25.2	0.05%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e-1	-2.718e+00	0.2367	5.0	0.63%	129.5	0.27%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e-1	-2.715e+00	0.2367	47.0	5.93%	2250.0	4.71%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-1	-2.666e+00	0.2433	66.0	8.32%	3300.1	6.91%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-1	-2.647e+00	0.2458	45.0	5.67%	2154.7	4.51%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e-1	-2.617e+00	0.2485	5.0	0.63%	133.3	0.28%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e-1	-2.617e+00	0.2485	5.0	0.63%	133.3	0.28%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e-1	-2.612e+00	0.2485	32.0	4.04%	1464.8	3.07%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-1	-2.601e+00	0.2485	26.0	3.28%	1151.0	2.41%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e-1	-2.574e+00	0.2523	28.0	3.53%	1259.3	2.64%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-1	-2.526e+00	0.2624	7.0	0.88%	222.3	0.47%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-1	-2.513e+00	0.2634	27.0	3.40%	1215.6	2.54%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e-1	-2.473e+00	0.2716	5.0	0.63%	139.9	0.29%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e-1	-2.447e+00	0.2763	23.0	2.90%	1015.1	2.12%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-1	-2.444e+00	0.2763	29.0	3.66%	1330.0	2.78%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e-1	-2.424e+00	0.2779	85.0	10.72%	4421.6	9.25%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e-1	-2.373e+00	0.2901	14.0	1.77%	565.9	1.18%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-1	-2.312e+00	0.3054	65.0	8.20%	3325.7	6.96%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-2.270e+00	0.3159	14.0	1.77%	575.6	1.20%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-2.238e+00	0.3235	45.0	5.67%	2231.6	4.67%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-2.233e+00	0.3235	9.0	1.13%	333.5	0.70%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-2.199e+00	0.3308	23.0	2.90%	1048.9	2.20%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-2.171e+00	0.3376	16.0	2.02%	687.8	1.44%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-2.167e+00	0.3376	12.0	1.51%	485.5	1.02%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-2.144e+00	0.3413	7.0	0.88%	245.4	0.51%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-2.115e+00	0.3486	12.0	1.51%	490.4	1.03%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-2.095e+00	0.3527	24.0	3.03%	1116.2	2.34%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-2.072e+00	0.3582	88.0	11.10%	4691.7	9.82%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-2.033e+00	0.3694	47.0	5.93%	2385.7	4.99%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-2.030e+00	0.3694	27.0	3.40%	1287.6	2.70%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-2.010e+00	0.3724	8.0	1.01%	302.1	0.63%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-2.007e+00	0.3724	76.0	9.58%	4026.8	8.43%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-2.002e+00	0.3724	5.0	0.63%	162.1	0.34%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-1.999e+00	0.3724	11.0	1.39%	451.2	0.94%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-1.934e+00	0.3897	119.0	15.01%	6521.4	13.65%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-1.904e+00	0.3985	6.0	0.76%	214.7	0.45%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-1.878e+00	0.4064	1.0	0.13%	10.7	0.02%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.849e+00	0.4153	10.0	1.26%	415.5	0.87%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-1.816e+00	0.4259	36.0	4.54%	1820.7	3.81%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.812e+00	0.4259	18.0	2.27%	837.4	1.75%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-1.806e+00	0.4259	77.0	9.71%	4143.4	8.67%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-1.766e+00	0.4386	87.0	10.97%	4731.2	9.90%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-1.748e+00	0.4431	5.0	0.63%	178.0	0.37%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-1.719e+00	0.4533	10.0	1.26%	428.2	0.90%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-1.717e+00	0.4533	9.0	1.13%	377.4	0.79%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-1.709e+00	0.4533	36.0	4.54%	1843.7	3.86%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-1.698e+00	0.4534	69.0	8.70%	3718.3	7.78%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-1.642e+00	0.4763	3.0	0.38%	91.3	0.19%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-1.602e+00	0.4925	8.0	1.01%	337.3	0.71%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.575e+00	0.5022	64.0	8.07%	3469.6	7.26%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-1.574e+00	0.5022	14.0	1.77%	656.4	1.37%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	-1.573e+00	0.5022	1.0	0.13%	14.2	0.03%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-1.572e+00	0.5022	191.0	24.09%	10899.3	22.81%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-1.563e+00	0.5022	25.0	3.15%	1260.1	2.64%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-1.518e+00	0.5149	17.0	2.14%	827.6	1.73%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-1.512e+00	0.5149	12.0	1.51%	558.0	1.17%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-1.512e+00	0.5149	1.0	0.13%	15.4	0.03%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-1.498e+00	0.5149	37.0	4.67%	1948.9	4.08%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-1.465e+00	0.5290	83.0	10.47%	4606.6	9.64%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-1.436e+00	0.5414	67.0	8.45%	3688.0	7.72%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-1.435e+00	0.5414	30.0	3.78%	1567.0	3.28%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-1.434e+00	0.5414	2.0	0.25%	56.5	0.12%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.395e+00	0.5536	42.0	5.30%	2260.8	4.73%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.387e+00	0.5543	21.0	2.65%	1071.8	2.24%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-1.378e+00	0.5562	8.0	1.01%	361.0	0.76%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.351e+00	0.5679	12.0	1.51%	579.6	1.21%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-1.341e+00	0.5700	4.0	0.50%	157.0	0.33%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-1.333e+00	0.5711	28.0	3.53%	1477.9	3.09%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-1.327e+00	0.5716	17.0	2.14%	859.1	1.80%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-1.304e+00	0.5811	17.0	2.14%	863.3	1.81%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-1.292e+00	0.5846	38.0	4.79%	2059.1	4.31%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-1.238e+00	0.6136	34.0	4.29%	1844.8	3.86%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.234e+00	0.6136	58.0	7.31%	3236.8	6.77%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.222e+00	0.6165	13.0	1.64%	654.9	1.37%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-1.178e+00	0.6404	10.0	1.26%	494.9	1.04%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.170e+00	0.6420	26.0	3.28%	1402.9	2.94%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-1.108e+00	0.6794	32.0	4.04%	1765.2	3.69%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-1.104e+00	0.6794	19.0	2.40%	1016.3	2.13%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-1.095e+00	0.6803	66.0	8.32%	3758.9	7.87%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.092e+00	0.6803	5.0	0.63%	230.9	0.48%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.064e+00	0.6940	39.0	4.92%	2186.6	4.58%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-1.050e+00	0.6996	14.0	1.77%	741.2	1.55%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	-1.048e+00	0.6996	1.0	0.13%	26.6	0.06%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-1.030e+00	0.7063	3.0	0.38%	128.7	0.27%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-1.030e+00	0.7063	6.0	0.76%	292.2	0.61%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.008e+00	0.7141	4.0	0.50%	184.3	0.39%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-9.999e-01	0.7162	23.0	2.90%	1272.7	2.66%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-9.985e-01	0.7162	39.0	4.92%	2208.9	4.62%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-9.886e-01	0.7167	41.0	5.17%	2329.9	4.88%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-9.748e-01	0.7228	9.0	1.13%	469.2	0.98%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-9.663e-01	0.7252	11.0	1.39%	585.2	1.22%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-9.618e-01	0.7252	38.0	4.79%	2162.0	4.53%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-9.563e-01	0.7252	59.0	7.44%	3404.5	7.13%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-9.304e-01	0.7400	29.0	3.66%	1643.7	3.44%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-9.197e-01	0.7441	38.0	4.79%	2177.1	4.56%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-9.156e-01	0.7441	27.0	3.40%	1530.9	3.20%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-8.812e-01	0.7655	10.0	1.26%	543.9	1.14%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-8.806e-01	0.7655	29.0	3.66%	1659.8	3.47%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-8.636e-01	0.7712	22.0	2.77%	1251.7	2.62%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-8.577e-01	0.7719	4.0	0.50%	200.4	0.42%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-8.193e-01	0.7982	1.0	0.13%	35.2	0.07%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-8.090e-01	0.8024	69.0	8.70%	4070.1	8.52%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-8.053e-01	0.8024	146.0	18.41%	8686.0	18.18%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-8.051e-01	0.8024	9.0	1.13%	499.5	1.05%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-8.041e-01	0.8024	20.0	2.52%	1150.8	2.41%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-8.021e-01	0.8024	58.0	7.31%	3416.0	7.15%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-7.997e-01	0.8024	24.0	3.03%	1389.3	2.91%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-7.949e-01	0.8024	10.0	1.26%	560.0	1.17%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-7.891e-01	0.8024	46.0	5.80%	2705.6	5.66%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-7.751e-01	0.8024	24.0	3.03%	1397.0	2.92%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-7.594e-01	0.8072	1.0	0.13%	38.6	0.08%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-7.547e-01	0.8073	11.0	1.39%	628.1	1.31%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-7.535e-01	0.8073	3.0	0.38%	154.7	0.32%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-7.449e-01	0.8076	180.0	22.70%	10775.2	22.55%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-7.329e-01	0.8135	69.0	8.70%	4112.2	8.61%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-7.288e-01	0.8135	49.0	6.18%	2913.8	6.10%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-7.227e-01	0.8143	4.0	0.50%	217.7	0.46%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-7.117e-01	0.8195	12.0	1.51%	698.1	1.46%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-7.097e-01	0.8195	30.0	3.78%	1780.6	3.73%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-6.967e-01	0.8244	34.0	4.29%	2026.7	4.24%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-6.920e-01	0.8245	34.0	4.29%	2028.9	4.25%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-6.893e-01	0.8245	54.0	6.81%	3234.8	6.77%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-6.872e-01	0.8245	4.0	0.50%	222.7	0.47%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-6.826e-01	0.8245	17.0	2.14%	1007.9	2.11%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-6.802e-01	0.8245	24.0	3.03%	1430.6	2.99%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-6.734e-01	0.8245	4.0	0.50%	224.9	0.47%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-6.727e-01	0.8245	1.0	0.13%	44.0	0.09%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-6.646e-01	0.8245	5.0	0.63%	286.8	0.60%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-6.627e-01	0.8245	6.0	0.76%	347.5	0.73%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-6.599e-01	0.8245	97.0	12.23%	5845.6	12.24%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-6.570e-01	0.8245	1.0	0.13%	44.1	0.09%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-6.499e-01	0.8245	31.0	3.91%	1865.8	3.91%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-6.338e-01	0.8289	67.0	8.45%	4051.7	8.48%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-6.231e-01	0.8342	39.0	4.92%	2362.1	4.94%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-6.223e-01	0.8342	24.0	3.03%	1452.1	3.04%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-6.178e-01	0.8342	99.0	12.48%	5997.4	12.55%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-6.117e-01	0.8342	9.0	1.13%	541.5	1.13%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-5.900e-01	0.8478	68.0	8.58%	4140.2	8.67%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-5.810e-01	0.8483	3.0	0.38%	176.7	0.37%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-5.810e-01	0.8483	3.0	0.38%	176.5	0.37%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-5.752e-01	0.8498	10.0	1.26%	612.9	1.28%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-5.710e-01	0.8498	75.0	9.46%	4578.6	9.58%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-5.414e-01	0.8717	3.0	0.38%	182.0	0.38%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-5.232e-01	0.8841	4.0	0.50%	249.5	0.52%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-5.165e-01	0.8864	2.0	0.25%	121.5	0.25%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-5.162e-01	0.8864	64.0	8.07%	3948.1	8.26%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-5.154e-01	0.8864	22.0	2.77%	1374.7	2.88%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-5.121e-01	0.8864	18.0	2.27%	1128.8	2.36%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-5.036e-01	0.8864	149.0	18.79%	9129.4	19.11%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-5.005e-01	0.8864	12.0	1.51%	759.0	1.59%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-4.947e-01	0.8864	14.0	1.77%	886.1	1.85%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-4.945e-01	0.8864	2.0	0.25%	124.3	0.26%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-4.907e-01	0.8864	35.0	4.41%	2188.6	4.58%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e0	-4.898e-01	0.8864	151.0	19.04%	9265.6	19.39%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-4.832e-01	0.8864	67.0	8.45%	4156.5	8.70%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-4.688e-01	0.8897	137.0	17.28%	8437.5	17.66%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-4.554e-01	0.8982	28.0	3.53%	1775.8	3.72%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-4.553e-01	0.8982	14.0	1.77%	901.5	1.89%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-4.435e-01	0.9020	58.0	7.31%	3635.2	7.61%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-4.388e-01	0.9028	43.0	5.42%	2715.0	5.68%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-4.272e-01	0.9098	13.0	1.64%	849.2	1.78%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-4.222e-01	0.9108	13.0	1.64%	852.0	1.78%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-4.203e-01	0.9108	17.0	2.14%	1105.1	2.31%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-4.151e-01	0.9108	5.0	0.63%	338.9	0.71%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-4.102e-01	0.9114	2.0	0.25%	137.9	0.29%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-4.088e-01	0.9114	41.0	5.17%	2611.9	5.47%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-4.069e-01	0.9114	6.0	0.76%	406.8	0.85%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-4.026e-01	0.9114	78.0	9.84%	4900.2	10.26%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-3.986e-01	0.9114	2.0	0.25%	139.8	0.29%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-3.905e-01	0.9123	153.0	19.29%	9503.7	19.89%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	-3.904e-01	0.9123	1.0	0.13%	68.6	0.14%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-3.890e-01	0.9123	20.0	2.52%	1310.5	2.74%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-3.865e-01	0.9123	37.0	4.67%	2378.6	4.98%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-3.781e-01	0.9123	37.0	4.67%	2384.9	4.99%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-3.674e-01	0.9166	34.0	4.29%	2204.3	4.61%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-3.609e-01	0.9193	2.0	0.25%	146.6	0.31%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-3.529e-01	0.9234	36.0	4.54%	2340.0	4.90%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-3.393e-01	0.9327	1.0	0.13%	75.7	0.16%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-3.346e-01	0.9336	6.0	0.76%	429.7	0.90%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-3.342e-01	0.9336	26.0	3.28%	1723.5	3.61%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-3.325e-01	0.9336	5.0	0.63%	362.7	0.76%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-3.321e-01	0.9336	32.0	4.04%	2104.2	4.40%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-3.313e-01	0.9336	26.0	3.28%	1725.7	3.61%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-3.209e-01	0.9336	70.0	8.83%	4489.8	9.40%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-3.204e-01	0.9336	4.0	0.50%	297.5	0.62%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-3.136e-01	0.9336	27.0	3.40%	1801.4	3.77%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-3.133e-01	0.9336	2.0	0.25%	156.9	0.33%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-3.126e-01	0.9336	12.0	1.51%	836.7	1.75%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-3.090e-01	0.9336	28.0	3.53%	1868.6	3.91%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-3.029e-01	0.9336	5.0	0.63%	372.2	0.78%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-3.016e-01	0.9336	1.0	0.13%	82.0	0.17%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-3.008e-01	0.9336	10.0	1.26%	710.3	1.49%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-3.003e-01	0.9336	26.0	3.28%	1747.2	3.66%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-2.990e-01	0.9336	12.0	1.51%	843.4	1.77%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-2.920e-01	0.9336	2.0	0.25%	161.8	0.34%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-2.879e-01	0.9336	2.0	0.25%	162.4	0.34%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-2.849e-01	0.9336	7.0	0.88%	516.3	1.08%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-2.705e-01	0.9336	5.0	0.63%	384.6	0.80%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-2.587e-01	0.9399	1.0	0.13%	89.5	0.19%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-2.537e-01	0.9414	2.0	0.25%	171.4	0.36%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-2.508e-01	0.9414	5.0	0.63%	392.6	0.82%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-2.467e-01	0.9418	2.0	0.25%	173.4	0.36%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-2.465e-01	0.9418	3.0	0.38%	249.4	0.52%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-2.408e-01	0.9418	3.0	0.38%	251.9	0.53%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-2.371e-01	0.9418	9.0	1.13%	676.8	1.42%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-2.343e-01	0.9418	15.0	1.89%	1081.2	2.26%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-2.272e-01	0.9447	10.0	1.26%	750.3	1.57%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-2.185e-01	0.9499	1.0	0.13%	98.5	0.21%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-2.181e-01	0.9499	20.0	2.52%	1424.7	2.98%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-2.075e-01	0.9542	40.0	5.04%	2731.3	5.72%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-2.047e-01	0.9542	7.0	0.88%	557.0	1.17%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-1.977e-01	0.9573	11.0	1.39%	838.7	1.76%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-1.956e-01	0.9573	1.0	0.13%	104.3	0.22%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-1.945e-01	0.9573	31.0	3.91%	2166.8	4.54%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.840e-01	0.9613	19.0	2.40%	1389.6	2.91%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-1.752e-01	0.9668	55.0	6.94%	3735.8	7.82%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-1.669e-01	0.9717	32.0	4.04%	2265.4	4.74%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.645e-01	0.9717	20.0	2.52%	1476.6	3.09%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-1.578e-01	0.9745	2.0	0.25%	205.8	0.43%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-1.562e-01	0.9745	47.0	5.93%	3253.8	6.81%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-1.561e-01	0.9745	9.0	1.13%	731.4	1.53%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.550e-01	0.9745	18.0	2.27%	1352.8	2.83%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-1.477e-01	0.9745	107.0	13.49%	7073.6	14.81%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-1.392e-01	0.9775	4.0	0.50%	376.1	0.79%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.286e-01	0.9848	6.0	0.76%	536.1	1.12%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-1.215e-01	0.9888	25.0	3.15%	1867.0	3.91%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-1.071e-01	1.0000	10.0	1.26%	851.1	1.78%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-1.003e-01	1.0000	23.0	2.90%	1767.4	3.70%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-9.891e-02	1.0000	76.0	9.58%	5240.0	10.97%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-8.894e-02	1.0000	5.0	0.63%	497.5	1.04%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-8.729e-02	1.0000	22.0	2.77%	1723.4	3.61%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-6.174e-02	1.0000	2.0	0.25%	272.4	0.57%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-6.010e-02	1.0000	38.0	4.79%	2879.5	6.03%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-5.868e-02	1.0000	10.0	1.26%	926.5	1.94%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-5.833e-02	1.0000	3.0	0.38%	368.7	0.77%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-5.807e-02	1.0000	33.0	4.16%	2548.0	5.33%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-5.791e-02	1.0000	6.0	0.76%	620.0	1.30%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-4.885e-02	1.0000	1.0	0.13%	183.6	0.38%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-4.843e-02	1.0000	15.0	1.89%	1320.4	2.76%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-4.670e-02	1.0000	75.0	9.46%	5379.8	11.26%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-4.216e-02	1.0000	15.0	1.89%	1339.9	2.80%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-4.052e-02	1.0000	3.0	0.38%	397.8	0.83%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-3.819e-02	1.0000	10.0	1.26%	977.9	2.05%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-3.694e-02	1.0000	7.0	0.88%	745.1	1.56%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-3.349e-02	1.0000	3.0	0.38%	412.9	0.86%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-2.934e-02	1.0000	1.0	0.13%	213.9	0.45%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-2.399e-02	1.0000	3.0	0.38%	438.3	0.92%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-2.066e-02	1.0000	14.0	1.77%	1357.7	2.84%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-8.890e-03	1.0000	65.0	8.20%	5089.5	10.65%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-8.307e-03	1.0000	1.0	0.13%	288.6	0.60%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-6.323e-03	1.0000	3.0	0.38%	539.4	1.13%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-1.363e-03	1.0000	14.0	1.77%	1665.1	3.49%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	55.6	0.12%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	0.000e+00	1.0000	0.0	0.00%	126.0	0.26%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	26.9	0.06%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	37.9	0.08%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	0.000e+00	1.0000	0.0	0.00%	168.6	0.35%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	13.4	0.03%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	31.7	0.07%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	0.000e+00	1.0000	0.0	0.00%	208.0	0.44%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	4.8	0.01%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	15.1	0.03%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	32.6	0.07%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	0.000e+00	1.0000	0.0	0.00%	131.2	0.27%