Information for 5-CTTTSCCTGCAAGTGC (Motif 9)

A G T C A C G T A C G T C A G T A T G C G T A C A T G C C G A T A C T G G T A C G T C A C G T A A T C G A C G T A C T G G T A C
Reverse Opposite:
A C T G G T A C C G T A A T G C C G A T A C G T A C T G A G T C C G T A A T C G A C T G A T C G G T C A T G C A G T C A C T A G
p-value:1e-13
log p-value:-3.120e+01
Information Content per bp:1.763
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.3 +/- 24.6bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CTTTSCCTGCAAGTGC--
------SDGCAGGTGCNS
 A G T C A C G T A C G T C A G T A T G C G T A C A T G C C G A T A C T G G T A C G T C A C G T A A T C G A C G T A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

STAT3/MA0144.2/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTTTSCCTGCAAGTGC
-TTTCCCAGAAN----
 A G T C A C G T A C G T C A G T A T G C G T A C A T G C C G A T A C T G G T A C G T C A C G T A A T C G A C G T A C T G G T A C
A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTTTSCCTGCAAGTGC
-TTTCCTGGAAA----
 A G T C A C G T A C G T C A G T A T G C G T A C A T G C C G A T A C T G G T A C G T C A C G T A A T C G A C G T A C T G G T A C
A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CTTTSCCTGCAAGTGC
-----ACAGGAAGTG-
 A G T C A C G T A C G T C A G T A T G C G T A C A T G C C G A T A C T G G T A C G T C A C G T A A T C G A C G T A C T G G T A C
A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T

Stat4/MA0518.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTTTSCCTGCAAGTGC
NNNTTTCCTGGAAA----
 A C G T A C G T A G T C A C G T A C G T C A G T A T G C G T A C A T G C C G A T A C T G G T A C G T C A C G T A A T C G A C G T A C T G G T A C
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CTTTSCCTGCAAGTGC--
--------KCACGTGMCN
 A G T C A C G T A C G T C A G T A T G C G T A C A T G C C G A T A C T G G T A C G T C A C G T A A T C G A C G T A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CTTTSCCTGCAAGTGC-
-------NTCAAGTGGN
 A G T C A C G T A C G T C A G T A T G C G T A C A T G C C G A T A C T G G T A C G T C A C G T A A T C G A C G T A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CTTTSCCTGCAAGTGC
-------NTCAAGTGG
 A G T C A C G T A C G T C A G T A T G C G T A C A T G C C G A T A C T G G T A C G T C A C G T A A T C G A C G T A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTTTSCCTGCAAGTGC--
-NTTNTATGAATGTGNNC
 A G T C A C G T A C G T C A G T A T G C G T A C A T G C C G A T A C T G G T A C G T C A C G T A A T C G A C G T A C T G G T A C A C G T A C G T
A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CTTTSCCTGCAAGTGC
-------AACAGGTGT
 A G T C A C G T A C G T C A G T A T G C G T A C A T G C C G A T A C T G G T A C G T C A C G T A A T C G A C G T A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T