Information for 9-CGCGCATGCG (Motif 25)

A T G C T C A G G T A C C T A G A G T C T G C A A G C T A C T G A T G C A C T G
Reverse Opposite:
T G A C T A C G G T A C T C G A A C G T C T A G A G T C A C T G A G T C T A C G
p-value:1e-8
log p-value:-1.917e+01
Information Content per bp:1.692
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.53%
Number of Background Sequences with motif447.2
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets56.2 +/- 27.4bp
Average Position of motif in Background50.4 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:CGCGCATGCG-
TGCGCAGGCGC
 A T G C T C A G G T A C C T A G A G T C T G C A A G C T A C T G A T G C A C T G A C G T
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

NRF(NRF)/Promoter/Homer

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CGCGCATGCG-
GTGCGCATGCGC
 A C G T A T G C T C A G G T A C C T A G A G T C T G C A A G C T A C T G A T G C A C T G A C G T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:CGCGCATGCG---
-GCGCATGCGCAG
 A T G C T C A G G T A C C T A G A G T C T G C A A G C T A C T G A T G C A C T G A C G T A C G T A C G T
A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CGCGCATGCG
NNCGCGTGNN
 A T G C T C A G G T A C C T A G A G T C T G C A A G C T A C T G A T G C A C T G
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CGCGCATGCG---
NNTNCGCACCTGTNGAN
 A C G T A C G T A C G T A C G T A T G C T C A G G T A C C T A G A G T C T G C A A G C T A C T G A T G C A C T G A C G T A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGCGCATGCG-
SNGCACCTGCHS
 A C G T A T G C T C A G G T A C C T A G A G T C T G C A A G C T A C T G A T G C A C T G A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

PB0095.1_Zfp161_1/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CGCGCATGCG-
TGGCGCGCGCGCCTGA
 A C G T A C G T A C G T A C G T A C G T A T G C T C A G G T A C C T A G A G T C T G C A A G C T A C T G A T G C A C T G A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGCGCATGCG
CGCACCTGCT
 A T G C T C A G G T A C C T A G A G T C T G C A A G C T A C T G A T G C A C T G
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGCGCATGCG
AGCGCGCC----
 A C G T A C G T A T G C T C A G G T A C C T A G A G T C T G C A A G C T A C T G A T G C A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGCGCATGCG
--TGCGTG--
 A T G C T C A G G T A C C T A G A G T C T G C A A G C T A C T G A T G C A C T G
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T