Information for 18-CTGTGAGCACACA (Motif 23)

A G T C A C G T A T C G C G A T A T C G C G T A A T C G G T A C C G T A A G T C G C T A A T G C C G T A
Reverse Opposite:
A C G T A T C G C G A T A C T G C G A T A C T G A T G C C G A T A T G C G C T A A T G C G T C A T C A G
p-value:1e-8
log p-value:-1.975e+01
Information Content per bp:1.740
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif20.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets33.2 +/- 20.8bp
Average Position of motif in Background44.3 +/- 40.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAGCACACA---
TACATGTGCACATAAAA
 A C G T A G T C A C G T A T C G C G A T A T C G C G T A A T C G G T A C C G T A A G T C G C T A A T G C C G T A A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTGTGAGCACACA-----
--AGCGGCACACACGCAA
 A G T C A C G T A T C G C G A T A T C G C G T A A T C G G T A C C G T A A G T C G C T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAGCACACA---
CAGATGTGCACATACGT
 A C G T A G T C A C G T A T C G C G A T A T C G C G T A A T C G G T A C C G T A A G T C G C T A A T G C C G T A A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGTGAGCACACA--
NNNVCTGWGYAAACASN
 A C G T A C G T A G T C A C G T A T C G C G A T A T C G C G T A A T C G G T A C C G T A A G T C G C T A A T G C C G T A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTGTGAGCACACA-----
--CGAAGCACACAAAATA
 A G T C A C G T A T C G C G A T A T C G C G T A A T C G G T A C C G T A A G T C G C T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTGTGAGCACACA--
----AGCCACTCAAG
 A G T C A C G T A T C G C G A T A T C G C G T A A T C G G T A C C G T A A G T C G C T A A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAGCACACA
SCTGTCARCACC--
 A C G T A G T C A C G T A T C G C G A T A T C G C G T A A T C G G T A C C G T A A G T C G C T A A T G C C G T A
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTGTGAGCACACA--
---GGACCACCCACG
 A G T C A C G T A T C G C G A T A T C G C G T A A T C G G T A C C G T A A G T C G C T A A T G C C G T A A C G T A C G T
A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

TGIF1/MA0796.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGTGAGCACACA
-TGACAGCTGTCA
 A G T C A C G T A T C G C G A T A T C G C G T A A T C G G T A C C G T A A G T C G C T A A T G C C G T A
A C G T G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAGCACACA---
NNNNTGAGCACTGTNNG
 A C G T A G T C A C G T A T C G C G A T A T C G C G T A A T C G G T A C C G T A A G T C G C T A A T G C C G T A A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G