Information for 11-GTGGGCCAAAGCC (Motif 13)

C T A G A C G T A C T G C T A G A C T G A G T C G T A C C T G A C G T A C G T A A C T G G T A C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A C G T A G C T A C T G C T A G G T A C A G T C A G T C C G T A A G T C
p-value:1e-10
log p-value:-2.531e+01
Information Content per bp:1.903
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.2 +/- 26.7bp
Average Position of motif in Background38.3 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTGGGCCAAAGCC----
-GGGGTCAAAGTCCAAT
 C T A G A C G T A C T G C T A G A C T G A G T C G T A C C T G A C G T A C G T A A C T G G T A C A G T C A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTGGGCCAAAGCC--
-TGGGGCAAAGGTCA
 C T A G A C G T A C T G C T A G A C T G A G T C G T A C C T G A C G T A C G T A A C T G G T A C A G T C A C G T A C G T
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTGGGCCAAAGCC
GTGGGCCCCA---
 C T A G A C G T A C T G C T A G A C T G A G T C G T A C C T G A C G T A C G T A A C T G G T A C A G T C
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTGGGCCAAAGCC--
GTAGGGCAAAGGTCA
 C T A G A C G T A C T G C T A G A C T G A G T C G T A C C T G A C G T A C G T A A C T G G T A C A G T C A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTGGGCCAAAGCC--
AGAGTCCAAAGTCCA
 C T A G A C G T A C T G C T A G A C T G A G T C G T A C C T G A C G T A C G T A A C T G G T A C A G T C A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTGGGCCAAAGCC
--GGAACAAAGR-
 C T A G A C G T A C T G C T A G A C T G A G T C G T A C C T G A C G T A C G T A A C T G G T A C A G T C
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTGGGCCAAAGCC-
--AGGTCAAGGTCA
 C T A G A C G T A C T G C T A G A C T G A G T C G T A C C T G A C G T A C G T A A C T G G T A C A G T C A C G T
A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTGGGCCAAAGCC--
CANAGNNCAAAGTCCA
 A C G T C T A G A C G T A C T G C T A G A C T G A G T C G T A C C T G A C G T A C G T A A C T G G T A C A G T C A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTGGGCCAAAGCC---
TTGGCANNNTGCCAAG
 C T A G A C G T A C T G C T A G A C T G A G T C G T A C C T G A C G T A C G T A A C T G G T A C A G T C A C G T A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTGGGCCAAAGCC-
--AGGTCAAGGTCA
 C T A G A C G T A C T G C T A G A C T G A G T C G T A C C T G A C G T A C G T A A C T G G T A C A G T C A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A