Information for 6-WCTGCAAAKATCA (Motif 9)

G C A T A G T C G C A T C A T G G T A C T G C A G T C A G T C A A C T G C T G A A C G T A T G C G T C A
Reverse Opposite:
A C G T A T C G C G T A A G C T G T A C C A G T A C G T A C G T C A T G G A T C C G T A C T A G C G T A
p-value:1e-12
log p-value:-2.789e+01
Information Content per bp:1.722
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif63.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets52.6 +/- 22.0bp
Average Position of motif in Background47.4 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:WCTGCAAAKATCA
-ANGNAAAGGTCA
 G C A T A G T C G C A T C A T G G T A C T G C A G T C A G T C A A C T G C T G A A C G T A T G C G T C A
A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

Tcf7/MA0769.1/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:WCTGCAAAKATCA----
-----AAAGATCAAAGG
 G C A T A G T C G C A T C A T G G T A C T G C A G T C A G T C A A C T G C T G A A C G T A T G C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:WCTGCAAAKATCA----
-TCTCAAAGGTCACCTG
 G C A T A G T C G C A T C A T G G T A C T G C A G T C A G T C A A C T G C T G A A C G T A T G C G T C A A C G T A C G T A C G T A C G T
A C G T C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

LEF1/MA0768.1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:WCTGCAAAKATCA-------
-----AAAGATCAAAGGGTT
 G C A T A G T C G C A T C A T G G T A C T G C A G T C A G T C A A C T G C T G A A C G T A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:WCTGCAAAKATCA-
----CAAAGGTCAG
 G C A T A G T C G C A T C A T G G T A C T G C A G T C A G T C A A C T G C T G A A C G T A T G C G T C A A C G T
A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.61
Offset:6
Orientation:forward strand
Alignment:WCTGCAAAKATCA-
------AAGGTCAC
 G C A T A G T C G C A T C A T G G T A C T G C A G T C A G T C A A C T G C T G A A C G T A T G C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:WCTGCAAAKATCA----
-TCTCAAAGGTCACGAG
 G C A T A G T C G C A T C A T G G T A C T G C A G T C A G T C A A C T G C T G A A C G T A T G C G T C A A C G T A C G T A C G T A C G T
A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-WCTGCAAAKATCA------
NDBAGATRWTATCTVNNNNN
 A C G T G C A T A G T C G C A T C A T G G T A C T G C A G T C A G T C A A C T G C T G A A C G T A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:WCTGCAAAKATCA-
----TCAAGGTCAN
 G C A T A G T C G C A T C A T G G T A C T G C A G T C A G T C A A C T G C T G A A C G T A T G C G T C A A C G T
A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:WCTGCAAAKATCA----
----CAAAGGTCAAGGG
 G C A T A G T C G C A T C A T G G T A C T G C A G T C A G T C A A C T G C T G A A C G T A T G C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G