Information for 4-RACAYCTTYTCAC (Motif 7)

C T G A C G T A A T G C C G T A A G T C A T G C A C G T A C G T A G C T C G A T A G T C G T C A A T G C
Reverse Opposite:
T A C G A C G T A C T G C G T A T C G A G T C A C G T A A T C G C T A G A C G T A T C G A C G T A G C T
p-value:1e-14
log p-value:-3.358e+01
Information Content per bp:1.779
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif26.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets56.8 +/- 27.8bp
Average Position of motif in Background48.3 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSC/MA0665.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:RACAYCTTYTCAC
AACAGCTGTT---
 C T G A C G T A A T G C C G T A A G T C A T G C A C G T A C G T A G C T C G A T A G T C G T C A A T G C
C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--RACAYCTTYTCAC-
CNGACACCTGTTCNNN
 A C G T A C G T C T G A C G T A A T G C C G T A A G T C A T G C A C G T A C G T A G C T C G A T A G T C G T C A A T G C A C G T
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

MYF6/MA0667.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:RACAYCTTYTCAC
AACAGCTGTT---
 C T G A C G T A A T G C C G T A A G T C A T G C A C G T A C G T A G C T C G A T A G T C G T C A A T G C
T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T A C G T A C G T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--RACAYCTTYTCAC
CGACCATCTGTT---
 A C G T A C G T C T G A C G T A A T G C C G T A A G T C A T G C A C G T A C G T A G C T C G A T A G T C G T C A A T G C
G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----RACAYCTTYTCAC
NNGGCGACACCTCNNN--
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A T G C C G T A A G T C A T G C A C G T A C G T A G C T C G A T A G T C G T C A A T G C
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-RACAYCTTYTCAC
TGACACCT------
 A C G T C T G A C G T A A T G C C G T A A G T C A T G C A C G T A C G T A G C T C G A T A G T C G T C A A T G C
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:RACAYCTTYTCAC
ACCACCTGTT---
 C T G A C G T A A T G C C G T A A G T C A T G C A C G T A C G T A G C T C G A T A G T C G T C A A T G C
G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--RACAYCTTYTCAC
GCAACAGCTGTTGT-
 A C G T A C G T C T G A C G T A A T G C C G T A A G T C A T G C A C G T A C G T A G C T C G A T A G T C G T C A A T G C
T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RACAYCTTYTCAC
AACACGTGTT---
 C T G A C G T A A T G C C G T A A G T C A T G C A C G T A C G T A G C T C G A T A G T C G T C A A T G C
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RACAYCTTYTCAC----
NTNTTCTTATCAGTNTN
 C T G A C G T A A T G C C G T A A G T C A T G C A C G T A C G T A G C T C G A T A G T C G T C A A T G C A C G T A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A