Information for 12-GCGCAYGCGC (Motif 27)

C T A G G A T C A T C G A T G C T C G A G A C T A C T G A T G C C A T G G T A C
Reverse Opposite:
A C T G G T A C T A C G G T A C C T G A A G C T A T C G T A G C C T A G G A T C
p-value:1e-5
log p-value:-1.251e+01
Information Content per bp:1.566
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.35%
Number of Background Sequences with motif572.6
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets57.6 +/- 23.2bp
Average Position of motif in Background51.1 +/- 38.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.41
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-GCGCAYGCGC
TGCGCAGGCGC
 A C G T C T A G G A T C A T C G A T G C T C G A G A C T A C T G A T G C C A T G G T A C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--GCGCAYGCGC
CTGCGCATGCGC
 A C G T A C G T C T A G G A T C A T C G A T G C T C G A G A C T A C T G A T G C C A T G G T A C
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--GCGCAYGCGC
GTGCGCATGCGC
 A C G T A C G T C T A G G A T C A T C G A T G C T C G A G A C T A C T G A T G C C A T G G T A C
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GCGCAYGCGC----
TGGCGCGCGCGCCTGA
 A C G T A C G T C T A G G A T C A T C G A T G C T C G A G A C T A C T G A T G C C A T G G T A C A C G T A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCGCAYGCGC-
-GGCACGCGTC
 C T A G G A T C A T C G A T G C T C G A G A C T A C T G A T G C C A T G G T A C A C G T
A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCGCAYGCGC
--GCACGTNC
 C T A G G A T C A T C G A T G C T C G A G A C T A C T G A T G C C A T G G T A C
A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

Tcfl5/MA0632.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCGCAYGCGC-
-GGCACGTGCC
 C T A G G A T C A T C G A T G C T C G A G A C T A C T G A T G C C A T G G T A C A C G T
A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCGCAYGCGC--
--KCACGTGMCN
 C T A G G A T C A T C G A T G C T C G A G A C T A C T G A T G C C A T G G T A C A C G T A C G T
A C G T A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCGCAYGCGC
---CACGCA-
 C T A G G A T C A T C G A T G C T C G A G A C T A C T G A T G C C A T G G T A C
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCGCAYGCGC-
-ATCACGTGAC
 C T A G G A T C A T C G A T G C T C G A G A C T A C T G A T G C C A T G G T A C A C G T
A C G T T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C