Information for 7-AGGACHCACTGATCAG (Motif 26)

C G T A A C T G A C T G C T G A A T G C G A C T A G T C C G T A A T G C A C G T A C T G C G T A A G C T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C T G A C G A T G T A C C G T A A T C G A C G T A C T G C T A G A T C G A G C T A G T C A G T C A C G T
p-value:1e-7
log p-value:-1.671e+01
Information Content per bp:1.837
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.7 +/- 33.3bp
Average Position of motif in Background52.3 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGGACHCACTGATCAG
NAGGTCACNNTGACC--
 A C G T C G T A A C T G A C T G C T G A A T G C G A C T A G T C C G T A A T G C A C G T A C T G C G T A A G C T A G T C C G T A A C T G
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGACHCACTGATCAG
VAGRACAKWCTGTYC--
 A C G T C G T A A C T G A C T G C T G A A T G C G A C T A G T C C G T A A T G C A C G T A C T G C G T A A G C T A G T C C G T A A C T G
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGGACHCACTGATCAG
VAGRACAKNCTGTBC--
 A C G T C G T A A C T G A C T G C T G A A T G C G A C T A G T C C G T A A T G C A C G T A C T G C G T A A G C T A G T C C G T A A C T G
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGGACHCACTGATCAG
AAGGTCACGGTGACCTG
 A C G T C G T A A C T G A C T G C T G A A T G C G A C T A G T C C G T A A T G C A C G T A C T G C G T A A G C T A G T C C G T A A C T G
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGACHCACTGATCAG-
-TGACCCAGTGACCTAC
 C G T A A C T G A C T G C T G A A T G C G A C T A G T C C G T A A T G C A C G T A C T G C G T A A G C T A G T C C G T A A C T G A C G T
A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

ESR2/MA0258.2/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGACHCACTGATCAG
AGGNCANNGTGACCT-
 C G T A A C T G A C T G C T G A A T G C G A C T A G T C C G T A A T G C A C G T A C T G C G T A A G C T A G T C C G T A A C T G
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGGACHCACTGATCAG
NAGAACAGNCTGTNCT-
 A C G T C G T A A C T G A C T G C T G A A T G C G A C T A G T C C G T A A T G C A C G T A C T G C G T A A G C T A G T C C G T A A C T G
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGGACHCACTGATCAG
AAGAACATWHTGTTC--
 A C G T C G T A A C T G A C T G C T G A A T G C G A C T A G T C C G T A A T G C A C G T A C T G C G T A A G C T A G T C C G T A A C T G
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGGACHCACTGATCAG
AGNACANNNTGTNCTN
 C G T A A C T G A C T G C T G A A T G C G A C T A G T C C G T A A T G C A C G T A C T G C G T A A G C T A G T C C G T A A C T G
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

PB0022.1_Gata5_1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AGGACHCACTGATCAG----
---NTNTTCTTATCAGTNTN
 C G T A A C T G A C T G C T G A A T G C G A C T A G T C C G T A A T G C A C G T A C T G C G T A A G C T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A