Information for 17-AGCAGTGAATAAG (Motif 25)

C G T A C T A G A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T G T C A A C G T A C G T A G T C C G T A A G T C C G A T A C T G A G T C A C G T
p-value:1e-7
log p-value:-1.671e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.2 +/- 8.5bp
Average Position of motif in Background51.8 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0170.1_Tgif2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGCAGTGAATAAG
AACTAGCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A C T A G A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C A C G T

PH0102.1_Meis1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGCAGTGAATAAG
AACGAGCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A C T A G A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C A C G T

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGCAGTGAATAAG
AAAGACCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A C T A G A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T

TBX21/MA0690.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCAGTGAATAAG
AAGGTGTGAA----
 A C G T C G T A C T A G A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCAGTGAATAAG
AAGGTGTKAA----
 A C G T C G T A C T A G A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCAGTGAATAAG
AAGGTGTGAAAAT-
 A C G T C G T A C T A G A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCAGTGAATAAG
TAGGTGTGAAG---
 A C G T C G T A C T A G A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGCAGTGAATAAG
-GCAGTGATTT--
 C G T A C T A G A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGCAGTGAATAAG
AATTACCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A C T A G A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCAGTGAATAAG
AGGTGTGAAA---
 C G T A C T A G A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T