Information for 13-GGCTGCCCTCTDG (Motif 19)

A C T G C T A G A G T C G A C T A C T G A T G C A T G C A T G C A G C T A G T C C A G T C A T G A T C G
Reverse Opposite:
A T G C G T A C G T C A A C T G T C G A A T C G A T C G T A C G T G A C C T G A T C A G A G T C G T A C
p-value:1e-9
log p-value:-2.283e+01
Information Content per bp:1.670
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.85%
Number of Background Sequences with motif445.1
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets60.5 +/- 25.2bp
Average Position of motif in Background50.0 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGCTGCCCTCTDG----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C T G C T A G A G T C G A C T A C T G A T G C A T G C A T G C A G C T A G T C C A G T C A T G A T C G A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGCTGCCCTCTDG------
ANAGTGCCACCTGGTGGCCA
 A C G T A C T G C T A G A G T C G A C T A C T G A T G C A T G C A T G C A G C T A G T C C A G T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGCTGCCCTCTDG
GGGGATTCCCCC---
 A C G T A C G T A C T G C T A G A G T C G A C T A C T G A T G C A T G C A T G C A G C T A G T C C A G T C A T G A T C G
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGCTGCCCTCTDG
-NYTTCCCGCC--
 A C T G C T A G A G T C G A C T A C T G A T G C A T G C A T G C A G C T A G T C C A G T C A T G A T C G
A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCTGCCCTCTDG------
TAGCGCCCCCTGGTGGCCA
 A C T G C T A G A G T C G A C T A C T G A T G C A T G C A T G C A G C T A G T C C A G T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGCTGCCCTCTDG
--CTGCCCGCA--
 A C T G C T A G A G T C G A C T A C T G A T G C A T G C A T G C A G C T A G T C C A G T C A T G A T C G
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGCTGCCCTCTDG--
---CGCCCCCTGACA
 A C T G C T A G A G T C G A C T A C T G A T G C A T G C A T G C A G C T A G T C C A G T C A T G A T C G A C G T A C G T
A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGCTGCCCTCTDG
---TGACCYCT--
 A C T G C T A G A G T C G A C T A C T G A T G C A T G C A T G C A G C T A G T C C A G T C A T G A T C G
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGCTGCCCTCTDG
---TTCCCCCTAC
 A C T G C T A G A G T C G A C T A C T G A T G C A T G C A T G C A G C T A G T C C A G T C A T G A T C G
A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGCTGCCCTCTDG
-NCTTCCCGCCC-
 A C T G C T A G A G T C G A C T A C T G A T G C A T G C A T G C A G C T A G T C C A G T C A T G A T C G
A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T