Information for 8-WTTTTKGCTYTGK (Motif 12)

C G T A A C G T A G C T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C T G A C G T
Reverse Opposite:
G T C A A G T C C G T A C T A G C G T A A C T G A G T C G T A C C G T A G T C A C T G A C G T A C G A T
p-value:1e-11
log p-value:-2.687e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.7 +/- 24.1bp
Average Position of motif in Background71.5 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-WTTTTKGCTYTGK--
NNTGTTTATTTTGGCA
 A C G T C G T A A C G T A G C T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

IRF7/MA0772.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:WTTTTKGCTYTGK-
ANTTTCGCTTTCGN
 C G T A A C G T A G C T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:WTTTTKGCTYTGK
-TRTTTACTTW--
 C G T A A C G T A G C T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C T G A C G T
A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---WTTTTKGCTYTGK
TCCATGTTTACTTTG-
 A C G T A C G T A C G T C G T A A C G T A G C T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C T G A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:WTTTTKGCTYTGK
-TGTTTACTTAGG
 C G T A A C G T A G C T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C T G A C G T
A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-WTTTTKGCTYTGK---
NSTGTTTRCWCAGBNNN
 A C G T C G T A A C G T A G C T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--WTTTTKGCTYTGK
BSNTGTTTACWYWGN
 A C G T A C G T C G T A A C G T A G C T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C T G A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--WTTTTKGCTYTGK
ANATTTTTGCAANTN
 A C G T A C G T C G T A A C G T A G C T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C T G A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-WTTTTKGCTYTGK
TTTTATGGCTN---
 A C G T C G T A A C G T A G C T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C T G A C G T
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:WTTTTKGCTYTGK
-TGTTTACTTT--
 C G T A A C G T A G C T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C T G A C G T
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T