Information for 11-CTAGGCTCAAGACCKA (Motif 17)

A G T C A C G T C G T A C T A G C T A G A T G C G A C T A T G C G T C A C G T A A C T G C G T A A T G C G T A C A C G T G T C A
Reverse Opposite:
A C G T G T C A C A T G A T C G C G A T G T A C C G A T A C G T A T C G C G T A A T C G A G T C G A T C C G A T C G T A A C T G
p-value:1e-9
log p-value:-2.216e+01
Information Content per bp:1.744
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.6 +/- 18.2bp
Average Position of motif in Background50.9 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CTAGGCTCAAGACCKA
-------CCAGACAG-
 A G T C A C G T C G T A C T A G C T A G A T G C G A C T A T G C G T C A C G T A A C T G C G T A A T G C G T A C A C G T G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTAGGCTCAAGACCKA---
--CAAATCCAGACATCACA
 A G T C A C G T C G T A C T A G C T A G A T G C G A C T A T G C G T C A C G T A A C T G C G T A A T G C G T A C A C G T G T C A A C G T A C G T A C G T
A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CTAGGCTCAAGACCKA-
-------CCAGACRSVB
 A G T C A C G T C G T A C T A G C T A G A T G C G A C T A T G C G T C A C G T A A C T G C G T A A T G C G T A C A C G T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CTAGGCTCAAGACCKA
BCNGGTTCTAGANCN-
 A G T C A C G T C G T A C T A G C T A G A T G C G A C T A T G C G T C A C G T A A C T G C G T A A T G C G T A C A C G T G T C A
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.46
Offset:3
Orientation:reverse strand
Alignment:CTAGGCTCAAGACCKA
---GTCACATGAY---
 A G T C A C G T C G T A C T A G C T A G A T G C G A C T A T G C G T C A C G T A A C T G C G T A A T G C G T A C A C G T G T C A
A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.46
Offset:0
Orientation:reverse strand
Alignment:CTAGGCTCAAGACCKA
CTAGGCCT--------
 A G T C A C G T C G T A C T A G C T A G A T G C G A C T A T G C G T C A C G T A A C T G C G T A A T G C G T A C A C G T G T C A
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.46
Offset:2
Orientation:reverse strand
Alignment:CTAGGCTCAAGACCKA
--AGGTGNCAGACAG-
 A G T C A C G T C G T A C T A G C T A G A T G C G A C T A T G C G T C A C G T A A C T G C G T A A T G C G T A C A C G T G T C A
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.46
Offset:2
Orientation:forward strand
Alignment:CTAGGCTCAAGACCKA
--AGGTGHCAGACA--
 A G T C A C G T C G T A C T A G C T A G A T G C G A C T A T G C G T C A C G T A A C T G C G T A A T G C G T A C A C G T G T C A
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:9
Score:0.46
Offset:-3
Orientation:forward strand
Alignment:---CTAGGCTCAAGACCKA
CGTCTAGACA---------
 A C G T A C G T A C G T A G T C A C G T C G T A C T A G C T A G A T G C G A C T A T G C G T C A C G T A A C T G C G T A A T G C G T A C A C G T G T C A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.45
Offset:-3
Orientation:forward strand
Alignment:---CTAGGCTCAAGACCKA
WDNCTGGGCA---------
 A C G T A C G T A C G T A G T C A C G T C G T A C T A G C T A G A T G C G A C T A T G C G T C A C G T A A C T G C G T A A T G C G T A C A C G T G T C A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T