Information for 5-AGTCATAATGAAA (Motif 6)

C G T A A C T G A C G T T A G C C G T A G C A T G C T A G T C A A C G T A T C G C G T A C G T A C T G A
Reverse Opposite:
A G C T G C A T A C G T A T G C C G T A A C G T C G A T C G T A A C G T A T C G T C G A G T A C C G A T
p-value:1e-21
log p-value:-4.884e+01
Information Content per bp:1.781
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.5 +/- 26.6bp
Average Position of motif in Background65.8 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:1
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-AGTCATAATGAAA-
BAGTCATANTGAAAG
 A C G T C G T A A C T G A C G T T A G C C G T A G C A T G C T A G T C A A C G T A T C G C G T A C G T A C T G A A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:2
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--AGTCATAATGAAA---
WNAGTCADAVTGAAACTN
 A C G T A C G T C G T A A C T G A C G T T A G C C G T A G C A T G C T A G T C A A C G T A T C G C G T A C G T A C T G A A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGTCATAATGAAA----
AAACATAATGAGGTTGC
 C G T A A C T G A C G T T A G C C G T A G C A T G C T A G T C A A C G T A T C G C G T A C G T A C T G A A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

IRF1/MA0050.2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGTCATAATGAAA------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T C G T A A C T G A C G T T A G C C G T A G C A T G C T A G T C A A C G T A T C G C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PB0176.1_Sox5_2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGTCATAATGAAA--
TATCATAATTAAGGA
 C G T A A C T G A C G T T A G C C G T A G C A T G C T A G T C A A C G T A T C G C G T A C G T A C T G A A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

PH0017.1_Cux1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGTCATAATGAAA-
TAGTGATCATCATTA
 A C G T C G T A A C T G A C G T T A G C C G T A G C A T G C T A G T C A A C G T A T C G C G T A C G T A C T G A A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

POU6F2/MA0793.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGTCATAATGAAA-
----NTAATGAGCT
 C G T A A C T G A C G T T A G C C G T A G C A T G C T A G T C A A C G T A T C G C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGTCATAATGAAA-
----ATGATGCAAT
 C G T A A C T G A C G T T A G C C G T A G C A T G C T A G T C A A C G T A T C G C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGTCATAATGAAA
-GTCATN------
 C G T A A C T G A C G T T A G C C G T A G C A T G C T A G T C A A C G T A T C G C G T A C G T A C T G A
A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.58
Offset:7
Orientation:forward strand
Alignment:AGTCATAATGAAA
-------ATTAAA
 C G T A A C T G A C G T T A G C C G T A G C A T G C T A G T C A A C G T A T C G C G T A C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A