Information for 3-NMGGGGAATTCCC (Motif 5)

T A G C G T A C C A T G A T C G A C T G C T A G T G C A G C T A C A G T A G C T A G T C A G T C G A T C
Reverse Opposite:
C A T G C T A G C T A G T C G A G T C A C G A T A C G T A G T C G T A C A T G C G T A C C A T G A T C G
p-value:1e-22
log p-value:-5.223e+01
Information Content per bp:1.589
Number of Target Sequences with motif73.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1059.2
Percentage of Background Sequences with motif2.23%
Average Position of motif in Targets47.5 +/- 26.7bp
Average Position of motif in Background50.2 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.93
Offset:1
Orientation:forward strand
Alignment:NMGGGGAATTCCC
-NGGGGATTTCCC
 T A G C G T A C C A T G A T C G A C T G C T A G T G C A G C T A C A G T A G C T A G T C A G T C G A T C
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.87
Offset:2
Orientation:forward strand
Alignment:NMGGGGAATTCCC
--GGGGATTTCC-
 T A G C G T A C C A T G A T C G A C T G C T A G T G C A G C T A C A G T A G C T A G T C A G T C G A T C
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.87
Offset:2
Orientation:forward strand
Alignment:NMGGGGAATTCCC
--GGGGATTTCC-
 T A G C G T A C C A T G A T C G A C T G C T A G T G C A G C T A C A G T A G C T A G T C A G T C G A T C
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:NMGGGGAATTCCC-
-AGGGGAATCCCCT
 T A G C G T A C C A T G A T C G A C T G C T A G T G C A G C T A C A G T A G C T A G T C A G T C G A T C A C G T
A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.84
Offset:2
Orientation:forward strand
Alignment:NMGGGGAATTCCC
--GGGAATTTCC-
 T A G C G T A C C A T G A T C G A C T G C T A G T G C A G C T A C A G T A G C T A G T C A G T C G A T C
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.83
Offset:1
Orientation:forward strand
Alignment:NMGGGGAATTCCC
-GGGGGAATCCCC
 T A G C G T A C C A T G A T C G A C T G C T A G T G C A G C T A C A G T A G C T A G T C A G T C G A T C
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:NMGGGGAATTCCC
--GGGAATTTCC-
 T A G C G T A C C A T G A T C G A C T G C T A G T G C A G C T A C A G T A G C T A G T C A G T C G A T C
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:NMGGGGAATTCCC-
-AGGGGATTCCCCT
 T A G C G T A C C A T G A T C G A C T G C T A G T G C A G C T A C A G T A G C T A G T C A G T C G A T C A C G T
A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:NMGGGGAATTCCC
-TGGGGA------
 T A G C G T A C C A T G A T C G A C T G C T A G T G C A G C T A C A G T A G C T A G T C A G T C G A T C
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:NMGGGGAATTCCC--
-----RCATTCCWGG
 T A G C G T A C C A T G A T C G A C T G C T A G T G C A G C T A C A G T A G C T A G T C A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G