Information for 16-AGCAGAGAAT (Motif 15)

C G T A A C T G A G T C C G T A A C T G C T G A A C T G C T G A C G T A A C G T
Reverse Opposite:
G T C A A C G T A G C T A G T C A G C T A G T C A C G T A C T G A G T C A C G T
p-value:1e-6
log p-value:-1.499e+01
Information Content per bp:1.932
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif84.4
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets54.0 +/- 33.1bp
Average Position of motif in Background46.8 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGCAGAGAAT-
-GCAGTGATTT
 C G T A A C T G A G T C C G T A A C T G C T G A A C T G C T G A C G T A A C G T A C G T
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGCAGAGAAT---
GNNACCGAGAATNNN
 A C G T A C G T C G T A A C T G A G T C C G T A A C T G C T G A A C T G C T G A C G T A A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCAGAGAAT-
TGCTGTGATTT
 C G T A A C T G A G T C C G T A A C T G C T G A A C T G C T G A C G T A A C G T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGCAGAGAAT---
CGAAGCACACAAAATA
 A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G C T G A A C T G C T G A C G T A A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGCAGAGAAT--
ATTTGCATACAATGG
 A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G C T G A A C T G C T G A C G T A A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCAGAGAAT
CACAGCAGGGGG-
 A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G C T G A A C T G C T G A C G T A A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGCAGAGAAT
NACAGGAAAT
 C G T A A C T G A G T C C G T A A C T G C T G A A C T G C T G A C G T A A C G T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGCAGAGAAT---
TTGACCGAGAATTCC
 A C G T A C G T C G T A A C T G A G T C C G T A A C T G C T G A A C T G C T G A C G T A A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCAGAGAAT
CAGCC------
 A C G T C G T A A C T G A G T C C G T A A C T G C T G A A C T G C T G A C G T A A C G T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGCAGAGAAT-
NNGAGATAAGA
 C G T A A C T G A G T C C G T A A C T G C T G A A C T G C T G A C G T A A C G T A C G T
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A