Information for 15-AGTTTGTAAC (Motif 13)

C T G A A C T G A C G T A G C T A C G T A T C G C G A T G T C A C G T A G T A C
Reverse Opposite:
A C T G A C G T A C G T C G T A T A G C C G T A T C G A T G C A G T A C A G C T
p-value:1e-8
log p-value:-2.056e+01
Information Content per bp:1.843
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif76.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets40.8 +/- 23.1bp
Average Position of motif in Background49.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGTTTGTAAC--
--TTTGAAACCG
 C T G A A C T G A C G T A G C T A C G T A T C G C G A T G T C A C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGTTTGTAAC---
--AATGTATCAAT
 C T G A A C T G A C G T A G C T A C G T A T C G C G A T G T C A C G T A G T A C A C G T A C G T A C G T
A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGTTTGTAAC----
NNNTTTNTAATACNG
 A C G T C T G A A C T G A C G T A G C T A C G T A T C G C G A T G T C A C G T A G T A C A C G T A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

NFIL3/MA0025.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGTTTGTAAC--
-TTATGTAACAT
 C T G A A C T G A C G T A G C T A C G T A T C G C G A T G T C A C G T A G T A C A C G T A C G T
A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGTTTGTAAC-
AGGTCTCTAACC
 A C G T C T G A A C T G A C G T A G C T A C G T A T C G C G A T G T C A C G T A G T A C A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

PB0159.1_Rfx4_2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGTTTGTAAC-------
--NNNGTAACTANGNNA
 C T G A A C T G A C G T A G C T A C G T A T C G C G A T G T C A C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGTTTGTAAC--
GHTACAWTGTADCHR
 A C G T A C G T A C G T C T G A A C T G A C G T A G C T A C G T A T C G C G A T G T C A C G T A G T A C A C G T A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGTTTGTAAC
RTTATGYAAB
 C T G A A C T G A C G T A G C T A C G T A T C G C G A T G T C A C G T A G T A C
T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGTTTGTAAC--
GHWACAWTGTWDCWA
 A C G T A C G T A C G T C T G A A C T G A C G T A G C T A C G T A T C G C G A T G T C A C G T A G T A C A C G T A C G T
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGTTTGTAAC---
---TTGCAACATN
 C T G A A C T G A C G T A G C T A C G T A T C G C G A T G T C A C G T A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C