Information for 8-MDRGGGAWTTYCC (Motif 8)

T G C A C G T A C T A G C T A G A C T G C T A G C T G A G C T A C G A T A G C T A G T C G T A C A G T C
Reverse Opposite:
C T A G A C T G C T A G C T G A G C T A C G A T A G C T A G T C G T A C A G T C G A T C G C A T A C G T
p-value:1e-15
log p-value:-3.600e+01
Information Content per bp:1.627
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.77%
Number of Background Sequences with motif419.7
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets52.4 +/- 26.5bp
Average Position of motif in Background50.1 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.91
Offset:1
Orientation:forward strand
Alignment:MDRGGGAWTTYCC
-NGGGGATTTCCC
 T G C A C G T A C T A G C T A G A C T G C T A G C T G A G C T A C G A T A G C T A G T C G T A C A G T C
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.84
Offset:3
Orientation:forward strand
Alignment:MDRGGGAWTTYCC
---GGGGATTTCC
 T G C A C G T A C T A G C T A G A C T G C T A G C T G A G C T A C G A T A G C T A G T C G T A C A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:MDRGGGAWTTYCC
---GGGAATTTCC
 T G C A C G T A C T A G C T A G A C T G C T A G C T G A G C T A C G A T A G C T A G T C G T A C A G T C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.81
Offset:2
Orientation:forward strand
Alignment:MDRGGGAWTTYCC
--GGGGATTTCC-
 T G C A C G T A C T A G C T A G A C T G C T A G C T G A G C T A C G A T A G C T A G T C G T A C A G T C
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.81
Offset:2
Orientation:forward strand
Alignment:MDRGGGAWTTYCC
--GGGAATTTCC-
 T G C A C G T A C T A G C T A G A C T G C T A G C T G A G C T A C G A T A G C T A G T C G T A C A G T C
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:MDRGGGAWTTYCC-
-AGGGGAATCCCCT
 T G C A C G T A C T A G C T A G A C T G C T A G C T G A G C T A C G A T A G C T A G T C G T A C A G T C A C G T
A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:7
Score:0.77
Offset:1
Orientation:forward strand
Alignment:MDRGGGAWTTYCC
-GGGGGAATCCCC
 T G C A C G T A C T A G C T A G A C T G C T A G C T G A G C T A C G A T A G C T A G T C G T A C A G T C
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.75
Offset:1
Orientation:forward strand
Alignment:MDRGGGAWTTYCC-
-AGGGGAATCCCCT
 T G C A C G T A C T A G C T A G A C T G C T A G C T G A G C T A C G A T A G C T A G T C G T A C A G T C A C G T
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:MDRGGGAWTTYCC
-TGGGGA------
 T G C A C G T A C T A G C T A G A C T G C T A G C T G A G C T A C G A T A G C T A G T C G T A C A G T C
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:MDRGGGAWTTYCC---
------ATTTTCCATT
 T G C A C G T A C T A G C T A G A C T G C T A G C T G A G C T A C G A T A G C T A G T C G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T