Information for 16-GCGTTGCTCT (Motif 19)

A T C G A G T C A C T G G C A T A C G T A C T G A G T C A C G T A G T C C A G T
Reverse Opposite:
G T C A A C T G C G T A A C T G A G T C C G T A C G T A T G A C C T A G A T G C
p-value:1e-4
log p-value:-1.128e+01
Information Content per bp:1.825
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif174.6
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets50.6 +/- 22.8bp
Average Position of motif in Background52.6 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCGTTGCTCT----
NCCGTTGCTANGNGN
 A C G T A T C G A G T C A C T G G C A T A C G T A C T G A G T C A C G T A G T C C A G T A C G T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GCGTTGCTCT
----NGCTN-
 A T C G A G T C A C T G G C A T A C G T A C T G A G T C A C G T A G T C C A G T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCGTTGCTCT--
NNGCNCTGCGCGGC
 A C G T A C G T A T C G A G T C A C T G G C A T A C G T A C T G A G T C A C G T A G T C C A G T A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCGTTGCTCT----
NNCGTTGCTATGGNN
 A C G T A T C G A G T C A C T G G C A T A C G T A C T G A G T C A C G T A G T C C A G T A C G T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCGTTGCTCT----
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A T C G A G T C A C T G G C A T A C G T A C T G A G T C A C G T A G T C C A G T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Tcf7/MA0769.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCGTTGCTCT--
CCTTTGATCTTT
 A T C G A G T C A C T G G C A T A C G T A C T G A G T C A C G T A G T C C A G T A C G T A C G T
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

LEF1/MA0768.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCGTTGCTCT--
AACCCTTTGATCTTT
 A C G T A C G T A C G T A T C G A G T C A C T G G C A T A C G T A C T G A G T C A C G T A G T C C A G T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCGTTGCTCT---
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T A T C G A G T C A C T G G C A T A C G T A C T G A G T C A C G T A G T C C A G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCGTTGCTCT--------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C T G G C A T A C G T A C T G A G T C A C G T A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCGTTGCTCT-
-----GCTCCG
 A T C G A G T C A C T G G C A T A C G T A C T G A G T C A C G T A G T C C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G