Information for 8-GAGCCAAAAAGCC (Motif 4)

C T A G C G T A C T A G G T A C A G T C G T C A T G C A C G T A C G T A C G T A A C T G A G T C G T A C
Reverse Opposite:
A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A G T C
p-value:1e-13
log p-value:-3.170e+01
Information Content per bp:1.886
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.9 +/- 27.0bp
Average Position of motif in Background35.1 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGCCAAAAAGCC
AAGCCATAAAA--
 C T A G C G T A C T A G G T A C A G T C G T C A T G C A C G T A C G T A C G T A A C T G A G T C G T A C
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:2
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGCCAAAAAGCC
-GGCCATAAATCA
 C T A G C G T A C T A G G T A C A G T C G T C A T G C A C G T A C G T A C G T A A C T G A G T C G T A C
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GAGCCAAAAAGCC
ARGAGGMCAAAATGW-
 A C G T A C G T A C G T C T A G C G T A C T A G G T A C A G T C G T C A T G C A C G T A C G T A C G T A A C T G A G T C G T A C
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAGCCAAAAAGCC
-NGYCATAAAWCH
 C T A G C G T A C T A G G T A C A G T C G T C A T G C A C G T A C G T A C G T A A C T G A G T C G T A C
A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GAGCCAAAAAGCC
-----ACAAAG--
 C T A G C G T A C T A G G T A C A G T C G T C A T G C A C G T A C G T A C G T A A C T G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GAGCCAAAAAGCC-
CCGCCCAAGGGCAG
 C T A G C G T A C T A G G T A C A G T C G T C A T G C A C G T A C G T A C G T A A C T G A G T C G T A C A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

PH0064.1_Hoxb9/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAGCCAAAAAGCC--
AGAGCCATAAAATTCG
 A C G T C T A G C G T A C T A G G T A C A G T C G T C A T G C A C G T A C G T A C G T A A C T G A G T C G T A C A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GAGCCAAAAAGCC-
-GGCCATAAATCAC
 C T A G C G T A C T A G G T A C A G T C G T C A T G C A C G T A C G T A C G T A A C T G A G T C G T A C A C G T
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GAGCCAAAAAGCC
--------CAGCC
 C T A G C G T A C T A G G T A C A G T C G T C A T G C A C G T A C G T A C G T A A C T G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GAGCCAAAAAGCC
-GGCCATAAATCA
 C T A G C G T A C T A G G T A C A G T C G T C A T G C A C G T A C G T A C G T A A C T G A G T C G T A C
A C G T C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A