Information for 3-TTCTCTCCTTCAACYG (Motif 3)

A C G T A G C T A T G C A C G T A G T C A G C T A G T C A T G C G A C T G A C T T A G C C G T A C G T A A T G C A G T C A C T G
Reverse Opposite:
A G T C T C A G A T C G A C G T C G A T A T C G C T G A C G T A A T C G A C T G T C G A T C A G G T C A A T C G C T G A G T C A
p-value:1e-14
log p-value:-3.386e+01
Information Content per bp:1.698
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.2 +/- 26.4bp
Average Position of motif in Background55.3 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTCTCTCCTTCAACYG
NNAATTCTCGNTNAN---
 A C G T A C G T A C G T A G C T A T G C A C G T A G T C A G C T A G T C A T G C G A C T G A C T T A G C C G T A C G T A A T G C A G T C A C T G
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTCTCTCCTTCAACYG
NNNTTTCCTGGAAA--
 A C G T A G C T A T G C A C G T A G T C A G C T A G T C A T G C G A C T G A C T T A G C C G T A C G T A A T G C A G T C A C T G
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TTCTCTCCTTCAACYG
ACCACTCTCGGTCAC---
 A C G T A C G T A C G T A G C T A T G C A C G T A G T C A G C T A G T C A T G C G A C T G A C T T A G C C G T A C G T A A T G C A G T C A C T G
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TTCTCTCCTTCAACYG
TTCACACCTT------
 A C G T A G C T A T G C A C G T A G T C A G C T A G T C A T G C G A C T G A C T T A G C C G T A C G T A A T G C A G T C A C T G
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TTCTCTCCTTCAACYG
---TTTCCTGGAAA--
 A C G T A G C T A T G C A C G T A G T C A G C T A G T C A T G C G A C T G A C T T A G C C G T A C G T A A T G C A G T C A C T G
A C G T A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TTCTCTCCTTCAACYG
---GCTCGTAAAAA--
 A C G T A G C T A T G C A C G T A G T C A G C T A G T C A T G C G A C T G A C T T A G C C G T A C G T A A T G C A G T C A C T G
A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TTCTCTCCTTCAACYG
NTTTTCACACCTT------
 A C G T A C G T A C G T A C G T A G C T A T G C A C G T A G T C A G C T A G T C A T G C G A C T G A C T T A G C C G T A C G T A A T G C A G T C A C T G
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TTCTCTCCTTCAACYG
NNNCTTTCCAGGAAA--
 A C G T A C G T A G C T A T G C A C G T A G T C A G C T A G T C A T G C G A C T G A C T T A G C C G T A C G T A A T G C A G T C A C T G
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TTCTCTCCTTCAACYG
ATTAACACCT-------
 A C G T A C G T A G C T A T G C A C G T A G T C A G C T A G T C A T G C G A C T G A C T T A G C C G T A C G T A A T G C A G T C A C T G
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCTCCTTCAACYG
TTTCACACCT-------
 A C G T A C G T A G C T A T G C A C G T A G T C A G C T A G T C A T G C G A C T G A C T T A G C C G T A C G T A A T G C A G T C A C T G
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T