Information for 7-AAACACTGCATTT (Motif 2)

C G T A G T C A T C G A G A T C T C G A A G T C A C G T C A T G G T A C T G C A C G A T A C G T A C G T
Reverse Opposite:
T C G A C G T A C G T A A C G T A C T G G T A C C G T A C T A G A G C T C T A G A C G T A C G T C G A T
p-value:1e-16
log p-value:-3.845e+01
Information Content per bp:1.773
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif35.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets51.8 +/- 23.1bp
Average Position of motif in Background49.9 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX4/MA0867.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AAACACTGCATTT----
-AACACTGCAATTGTTC
 C G T A G T C A T C G A G A T C T C G A A G T C A C G T C A T G G T A C T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

Sox11/MA0869.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AAACACTGCATTT---
-AACACTGAAATTGTT
 C G T A G T C A T C G A G A T C T C G A A G T C A C G T C A T G G T A C T G C A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAACACTGCATTT--
AATCGCACTGCATTCCG
 A C G T A C G T C G T A G T C A T C G A G A T C T C G A A G T C A C G T C A T G G T A C T G C A C G A T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

SOX21/MA0866.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAACACTGCATTT---
-AACACTACCATTGTT
 C G T A G T C A T C G A G A T C T C G A A G T C A C G T C A T G G T A C T G C A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

SOX8/MA0868.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AAACACTGCATTT----
-AACACTGCACATTGTT
 C G T A G T C A T C G A G A T C T C G A A G T C A C G T C A T G G T A C T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAACACTGCATTT
AAATCACTGC----
 A C G T C G T A G T C A T C G A G A T C T C G A A G T C A C G T C A T G G T A C T G C A C G A T A C G T A C G T
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAACACTGCATTT
AAATCACAGCA---
 A C G T C G T A G T C A T C G A G A T C T C G A A G T C A C G T C A T G G T A C T G C A C G A T A C G T A C G T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAACACTGCATTT
AAGCACTTAA---
 C G T A G T C A T C G A G A T C T C G A A G T C A C G T C A T G G T A C T G C A C G A T A C G T A C G T
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAACACTGCATTT
GAAAAAATTGCAAGG
 A C G T A C G T C G T A G T C A T C G A G A T C T C G A A G T C A C G T C A T G G T A C T G C A C G A T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0171.1_Sox18_2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAACACTGCATTT-----
--GGACTGAATTCATGCC
 C G T A G T C A T C G A G A T C T C G A A G T C A C G T C A T G G T A C T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C