Information for 5-TATTCAGACATTT (Motif 9)

A C G T C G T A A G C T A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C G T A C G T A G C T
Reverse Opposite:
C T G A C G T A C G T A C G A T C T A G A C G T A T G C A C G T A C T G C G T A C T G A C G A T C G T A
p-value:1e-10
log p-value:-2.486e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 24.8bp
Average Position of motif in Background74.3 +/- 2.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EOMES/MA0800.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TATTCAGACATTT
NTTTTCACACCTT-
 A C G T A C G T C G T A A G C T A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C G T A C G T A G C T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TATTCAGACATTT
--TTCACACCTT-
 A C G T C G T A A G C T A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C G T A C G T A G C T
A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TATTCAGACATTT--
CAAATCCAGACATCACA
 A C G T A C G T A C G T C G T A A G C T A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C G T A C G T A G C T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TATTCAGACATTT--
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T C G T A A G C T A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C G T A C G T A G C T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TATTCAGACATTT
--TTMACACCTT-
 A C G T C G T A A G C T A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C G T A C G T A G C T
A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TATTCAGACATTT
-TTTCACACCT--
 A C G T C G T A A G C T A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C G T A C G T A G C T
A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TATTCAGACATTT
---TCACACCT--
 A C G T C G T A A G C T A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C G T A C G T A G C T
A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TATTCAGACATTT
GACCACATTCATACAAT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C G T A C G T A G C T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TATTCAGACATTT
-TTTCACACCTN-
 A C G T C G T A A G C T A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C G T A C G T A G C T
A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TATTCAGACATTT
-CTTCACACCTA-
 A C G T C G T A A G C T A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C G T A C G T A G C T
A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T