Information for 4-TAGATGGCAD (Motif 2)

G C A T C G T A T A C G T C G A C A G T C T A G A C T G A G T C C G T A C T A G
Reverse Opposite:
G A T C C G A T T C A G T G A C G A T C G T C A A G C T A T G C C G A T C G T A
p-value:1e-77
log p-value:-1.786e+02
Information Content per bp:1.635
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif9.62%
Number of Background Sequences with motif224.0
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets57.4 +/- 22.3bp
Average Position of motif in Background46.1 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TAGATGGCAD
-AGGTGTCA-
 G C A T C G T A T A C G T C G A C A G T C T A G A C T G A G T C C G T A C T A G
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TAGATGGCAD
-ARNTGACA-
 G C A T C G T A T A C G T C G A C A G T C T A G A C T G A G T C C G T A C T A G
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TAGATGGCAD
AACAGATGGC--
 A C G T A C G T G C A T C G T A T A C G T C G A C A G T C T A G A C T G A G T C C G T A C T A G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TAGATGGCAD
-GGTTGGCAT
 G C A T C G T A T A C G T C G A C A G T C T A G A C T G A G T C C G T A C T A G
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TAGATGGCAD---
AACTAGCTGTCAATAC
 A C G T A C G T A C G T G C A T C G T A T A C G T C G A C A G T C T A G A C T G A G T C C G T A C T A G A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TAGATGGCAD----
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T G C A T C G T A T A C G T C G A C A G T C T A G A C T G A G T C C G T A C T A G A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAGATGGCAD
-AGGTGTGA-
 G C A T C G T A T A C G T C G A C A G T C T A G A C T G A G T C C G T A C T A G
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TAGATGGCAD--
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A C G T G C A T C G T A T A C G T C G A C A G T C T A G A C T G A G T C C G T A C T A G A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAGATGGCAD-
-AGGTGTGAAM
 G C A T C G T A T A C G T C G A C A G T C T A G A C T G A G T C C G T A C T A G A C G T
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TAGATGGCAD
--RHTGWCAR
 G C A T C G T A T A C G T C G A C A G T C T A G A C T G A G T C C G T A C T A G
A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A