Information for 11-CTCWKWWMWGAGC (Motif 17)

A G T C A C G T A G T C C G A T A C T G C G T A C G A T G T A C C G T A A C T G C G T A A C T G A T G C
Reverse Opposite:
A T C G A G T C A C G T A G T C C G A T A C T G C G T A C G A T G T A C C G T A A C T G C G T A A C T G
p-value:1e-3
log p-value:-9.151e+00
Information Content per bp:1.820
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif13.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets61.3 +/- 33.8bp
Average Position of motif in Background37.6 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.57
Offset:9
Orientation:forward strand
Alignment:CTCWKWWMWGAGC-
---------CAGCC
 A G T C A C G T A G T C C G A T A C T G C G T A C G A T G T A C C G T A A C T G C G T A A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CTCWKWWMWGAGC
-------CGGAGC
 A G T C A C G T A G T C C G A T A C T G C G T A C G A T G T A C C G T A A C T G C G T A A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

PB0184.1_Tbp_2/Jaspar

Match Rank:3
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CTCWKWWMWGAGC
GNNCGCTTAAATCGG-
 A C G T A C G T A C G T A G T C A C G T A G T C C G A T A C T G C G T A C G A T G T A C C G T A A C T G C G T A A C T G A T G C
C A T G T A C G C A G T G T A C A T C G T A G C C G A T C A G T C G T A C G T A C T G A G C A T A T G C T A C G A C T G A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CTCWKWWMWGAGC
--NTTTTACGAGN
 A G T C A C G T A G T C C G A T A C T G C G T A C G A T G T A C C G T A A C T G C G T A A C T G A T G C
A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

POU6F2/MA0793.1/Jaspar

Match Rank:5
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CTCWKWWMWGAGC-
----NTAATGAGCT
 A G T C A C G T A G T C C G A T A C T G C G T A C G A T G T A C C G T A A C T G C G T A A C T G A T G C A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CTCWKWWMWGAGC--------
----NNNNTGAGCACTGTNNG
 A G T C A C G T A G T C C G A T A C T G C G T A C G A T G T A C C G T A A C T G C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PH0068.1_Hoxc13/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CTCWKWWMWGAGC---
NAATTTTACGAGNTNN
 A G T C A C G T A G T C C G A T A C T G C G T A C G A T G T A C C G T A A C T G C G T A A C T G A T G C A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:CTCWKWWMWGAGC-----
-TCNNTTTACAGCGNNNT
 A G T C A C G T A G T C C G A T A C T G C G T A C G A T G T A C C G T A A C T G C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:CTCWKWWMWGAGC-----
-TCNNTTTACAGCGNNNT
 A G T C A C G T A G T C C G A T A C T G C G T A C G A T G T A C C G T A A C T G C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

MEF2B/MA0660.1/Jaspar

Match Rank:10
Score:0.46
Offset:1
Orientation:forward strand
Alignment:CTCWKWWMWGAGC
-GCTATAAATAGC
 A G T C A C G T A G T C C G A T A C T G C G T A C G A T G T A C C G T A A C T G C G T A A C T G A T G C
A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C