Information for 14-TYTTGGCTCC (Motif 26)

A G C T G A C T A G C T A C G T A C T G T C A G A G T C C G A T T A G C G T A C
Reverse Opposite:
A C T G A C T G C G T A C T A G A G T C A G T C T G C A C T G A C T G A C T G A
p-value:1e-8
log p-value:-2.070e+01
Information Content per bp:1.751
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets37.3 +/- 26.7bp
Average Position of motif in Background50.6 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TYTTGGCTCC
-NTTGGCANN
 A G C T G A C T A G C T A C G T A C T G T C A G A G T C C G A T T A G C G T A C
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TYTTGGCTCC
--TTGGCA--
 A G C T G A C T A G C T A C G T A C T G T C A G A G T C C G A T T A G C G T A C
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TYTTGGCTCC
NNTTGGCANN
 A G C T G A C T A G C T A C G T A C T G T C A G A G T C C G A T T A G C G T A C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TYTTGGCTCC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A G C T G A C T A G C T A C G T A C T G T C A G A G T C C G A T T A G C G T A C A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TYTTGGCTCC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A G C T G A C T A G C T A C G T A C T G T C A G A G T C C G A T T A G C G T A C A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TYTTGGCTCC-
-----GCTCCG
 A G C T G A C T A G C T A C G T A C T G T C A G A G T C C G A T T A G C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TYTTGGCTCC---
-TTTGGCGCCAAA
 A G C T G A C T A G C T A C G T A C T G T C A G A G T C C G A T T A G C G T A C A C G T A C G T A C G T
A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TYTTGGCTCC
----NGCTN-
 A G C T G A C T A G C T A C G T A C T G T C A G A G T C C G A T T A G C G T A C
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TYTTGGCTCC
--TWGTCTGV
 A G C T G A C T A G C T A C G T A C T G T C A G A G T C C G A T T A G C G T A C
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------TYTTGGCTCC
NNTGTTTATTTTGGCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T A G C T A C G T A C T G T C A G A G T C C G A T T A G C G T A C
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T A C G T