Information for 12-CGCGKGACCA (Motif 23)

A T G C A T C G A G T C C T A G A C G T A C T G C T G A A T G C A T G C G C T A
Reverse Opposite:
C A G T A T C G T A C G A G C T A G T C G T C A A G T C T C A G A T G C A T C G
p-value:1e-10
log p-value:-2.428e+01
Information Content per bp:1.752
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.8 +/- 11.3bp
Average Position of motif in Background14.0 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CGCGKGACCA
NCACGTGACN-
 A C G T A T G C A T C G A G T C C T A G A C G T A C T G C T G A A T G C A T G C G C T A
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CGCGKGACCA
GGGCGGGACC-
 A C G T A T G C A T C G A G T C C T A G A C G T A C T G C T G A A T G C A T G C G C T A
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGCGKGACCA
TGCGTG----
 A T G C A T C G A G T C C T A G A C G T A C T G C T G A A T G C A T G C G C T A
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----CGCGKGACCA
NNGTCGCGTGNCAC
 A C G T A C G T A C G T A C G T A T G C A T C G A G T C C T A G A C G T A C T G C T G A A T G C A T G C G C T A
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CGCGKGACCA
NNCGCGTGNN--
 A C G T A C G T A T G C A T C G A G T C C T A G A C G T A C T G C T G A A T G C A T G C G C T A
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CGCGKGACCA
GGCACGTGCC--
 A C G T A C G T A T G C A T C G A G T C C T A G A C G T A C T G C T G A A T G C A T G C G C T A
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CGCGKGACCA
NCACGTGACN-
 A C G T A T G C A T C G A G T C C T A G A C G T A C T G C T G A A T G C A T G C G C T A
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CGCGKGACCA
RTCATGTGAC--
 A C G T A C G T A T G C A T C G A G T C C T A G A C G T A C T G C T G A A T G C A T G C G C T A
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CGCGKGACCA
-NCGTGACN-
 A T G C A T C G A G T C C T A G A C G T A C T G C T G A A T G C A T G C G C T A
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGCGKGACCA
GGCGGGAARN
 A T G C A T C G A G T C C T A G A C G T A C T G C T G A A T G C A T G C G C T A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G