Information for 7-AAAAATAACTCWG (Motif 11)

G C T A G C T A G T C A C G T A C G T A C A G T C T G A T C G A A G T C G C A T G A T C C G A T C T A G
Reverse Opposite:
A G T C C G T A C T A G C G T A C T A G A G C T G A C T G T C A C G A T C G A T C A G T C G A T C G A T
p-value:1e-12
log p-value:-2.992e+01
Information Content per bp:1.649
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif6.88%
Number of Background Sequences with motif954.2
Percentage of Background Sequences with motif2.05%
Average Position of motif in Targets51.7 +/- 26.4bp
Average Position of motif in Background51.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAAATAACTCWG
DCYAAAAATAGM----
 A C G T A C G T A C G T G C T A G C T A G T C A C G T A C G T A C A G T C T G A T C G A A G T C G C A T G A T C C G A T C T A G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AAAAATAACTCWG
ATGCTAAAAATAGAA---
 A C G T A C G T A C G T A C G T A C G T G C T A G C T A G T C A C G T A C G T A C A G T C T G A T C G A A G T C G C A T G A T C C G A T C T A G
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AAAAATAACTCWG
GCTAAAAATAGC----
 A C G T A C G T A C G T G C T A G C T A G T C A C G T A C G T A C A G T C T G A T C G A A G T C G C A T G A T C C G A T C T A G
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------AAAAATAACTCWG
GTTCAAAAAAAAAATTC--
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C T A G T C A C G T A C G T A C A G T C T G A T C G A A G T C G C A T G A T C C G A T C T A G
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAAAATAACTCWG
KCCAAAAATAGC----
 A C G T A C G T A C G T G C T A G C T A G T C A C G T A C G T A C A G T C T G A T C G A A G T C G C A T G A T C C G A T C T A G
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AAAAATAACTCWG
GTTAAAAAAAAAAATTA-
 A C G T A C G T A C G T A C G T A C G T G C T A G C T A G T C A C G T A C G T A C A G T C T G A T C G A A G T C G C A T G A T C C G A T C T A G
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAAAATAACTCWG
CAAACAACAACACCT
 A C G T A C G T G C T A G C T A G T C A C G T A C G T A C A G T C T G A T C G A A G T C G C A T G A T C C G A T C T A G
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAAAATAACTCWG
CTACCAATAAAATTCT-
 A C G T A C G T A C G T A C G T G C T A G C T A G T C A C G T A C G T A C A G T C T G A T C G A A G T C G C A T G A T C C G A T C T A G
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAAAATAACTCWG--
AAAAATAACAAACGG
 G C T A G C T A G T C A C G T A C G T A C A G T C T G A T C G A A G T C G C A T G A T C C G A T C T A G A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------AAAAATAACTCWG
TACTGGAAAAAAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C T A G T C A C G T A C G T A C A G T C T G A T C G A A G T C G C A T G A T C C G A T C T A G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T