Information for 3-AGAACAGAGAGGAAAG (Motif 5)

C G T A C T A G C G T A C G T A T G A C C G T A C T A G C G T A C T A G C G T A A C T G A C T G C G T A C G T A C G T A A C T G
Reverse Opposite:
G T A C A C G T A C G T A C G T A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C G T A C G T A G T C A C G T
p-value:1e-11
log p-value:-2.607e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 23.7bp
Average Position of motif in Background64.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.62
Offset:7
Orientation:forward strand
Alignment:AGAACAGAGAGGAAAG
-------AGAGGAA--
 C G T A C T A G C G T A C G T A T G A C C G T A C T A G C G T A C T A G C G T A A C T G A C T G C G T A C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AGAACAGAGAGGAAAG-
-----AGAAACGAAAGT
 C G T A C T A G C G T A C G T A T G A C C G T A C T A G C G T A C T A G C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGAACAGAGAGGAAAG
AGAAGAACAAAGGACTA--
 A C G T A C G T A C G T C G T A C T A G C G T A C G T A T G A C C G T A C T A G C G T A C T A G C G T A A C T G A C T G C G T A C G T A C G T A A C T G
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:AGAACAGAGAGGAAAG
------NACAGGAAAT
 C G T A C T A G C G T A C G T A T G A C C G T A C T A G C G T A C T A G C G T A A C T G A C T G C G T A C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGAACAGAGAGGAAAG
ATAAGAACAAAGGACTA--
 A C G T A C G T A C G T C G T A C T A G C G T A C G T A T G A C C G T A C T A G C G T A C T A G C G T A A C T G A C T G C G T A C G T A C G T A A C T G
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AGAACAGAGAGGAAAG--
------NDCAGGAARTNN
 C G T A C T A G C G T A C G T A T G A C C G T A C T A G C G T A C T A G C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGAACAGAGAGGAAAG-
-----AAAGATCAAAGG
 C G T A C T A G C G T A C G T A T G A C C G T A C T A G C G T A C T A G C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGAACAGAGAGGAAAG
GGAACAAAGR------
 C G T A C T A G C G T A C G T A T G A C C G T A C T A G C G T A C T A G C G T A A C T G A C T G C G T A C G T A C G T A A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:AGAACAGAGAGGAAAG-
-------NNTGGAAANN
 C G T A C T A G C G T A C G T A T G A C C G T A C T A G C G T A C T A G C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:AGAACAGAGAGGAAAG-
-------AATGGAAAAT
 C G T A C T A G C G T A C G T A T G A C C G T A C T A G C G T A C T A G C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T