Information for 4-CACACSRMAGRAT (Motif 9)

A G T C C G T A A G T C C G T A A G T C A T G C T C G A G T A C C G T A A C T G C T G A C G T A A C G T
Reverse Opposite:
C G T A A C G T A G C T A G T C C G A T A C T G A G C T A T C G A C T G C G A T A C T G A C G T A C T G
p-value:1e-11
log p-value:-2.754e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.2 +/- 25.5bp
Average Position of motif in Background55.0 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MGA/MA0801.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACACSRMAGRAT
TCACACCT------
 A C G T A G T C C G T A A G T C C G T A A G T C A T G C T C G A G T A C C G T A A C T G C T G A C G T A A C G T
G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CACACSRMAGRAT
NAAACCACAG---
 A G T C C G T A A G T C C G T A A G T C A T G C T C G A G T A C C G T A A C T G C T G A C G T A A C G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CACACSRMAGRAT
TCACACCT------
 A C G T A G T C C G T A A G T C C G T A A G T C A T G C T C G A G T A C C G T A A C T G C T G A C G T A A C G T
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CACACSRMAGRAT
TCACACCT------
 A C G T A G T C C G T A A G T C C G T A A G T C A T G C T C G A G T A C C G T A A C T G C T G A C G T A A C G T
G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CACACSRMAGRAT
TCACACCT------
 A C G T A G T C C G T A A G T C C G T A A G T C A T G C T C G A G T A C C G T A A C T G C T G A C G T A A C G T
G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CACACSRMAGRAT
-AAACCACAGC--
 A G T C C G T A A G T C C G T A A G T C A T G C T C G A G T A C C G T A A C T G C T G A C G T A A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CACACSRMAGRAT
TTTGCACACGGCAC---
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C A T G C T C G A G T A C C G T A A C T G C T G A C G T A A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CACACSRMAGRAT
-AAACCACAGAN-
 A G T C C G T A A G T C C G T A A G T C A T G C T C G A G T A C C G T A A C T G C T G A C G T A A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

TBX4/MA0806.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CACACSRMAGRAT
TCACACCT------
 A C G T A G T C C G T A A G T C C G T A A G T C A T G C T C G A G T A C C G T A A C T G C T G A C G T A A C G T
G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CACACSRMAGRAT
CTTCACACCTA-----
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C A T G C T C G A G T A C C G T A A C T G C T G A C G T A A C G T
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T A C G T A C G T A C G T