Information for 3-GTTGGKGYAAATA (Motif 6)

A C T G A C G T A C G T A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A G A C T C G T A
Reverse Opposite:
A C G T C G T A C G A T A C G T C G A T C T A G A G T C G T C A A G T C G T A C C G T A C G T A G T A C
p-value:1e-13
log p-value:-3.016e+01
Information Content per bp:1.821
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.1 +/- 20.8bp
Average Position of motif in Background56.8 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTTGGKGYAAATA
--AGGTGTTAAT-
 A C T G A C G T A C G T A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A G A C T C G T A
A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GTTGGKGYAAATA
------GTAAACA
 A C T G A C G T A C G T A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A G A C T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTTGGKGYAAATA
---WAAGTAAAYA
 A C T G A C G T A C G T A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A G A C T C G T A
A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXI1/MA0042.2/Jaspar

Match Rank:4
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GTTGGKGYAAATA
------GTAAACA
 A C T G A C G T A C G T A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A G A C T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G C A T T G C A G T C A C G T A G A T C T C G A

FOXP3/MA0850.1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GTTGGKGYAAATA
------GTAAACA
 A C T G A C G T A C G T A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A G A C T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A

Hoxd3/MA0912.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTTGGKGYAAATA----
-TTGAGTTAATTAACCT
 A C T G A C G T A C G T A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A G A C T C G T A A C G T A C G T A C G T A C G T
A C G T G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

PH0079.1_Hoxd3/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTTGGKGYAAATA----
-TTGAGTTAATTAACCT
 A C T G A C G T A C G T A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A G A C T C G T A A C G T A C G T A C G T A C G T
A C G T G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

FOXO4/MA0848.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GTTGGKGYAAATA
------GTAAACA
 A C T G A C G T A C G T A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A G A C T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T T G C A G T C A C T G A G A T C C G T A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTTGGKGYAAATA
NATGTTGCAA---
 A C T G A C G T A C G T A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A G A C T C G T A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTTGGKGYAAATA--
---TATGTAAACANG
 A C T G A C G T A C G T A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A G A C T C G T A A C G T A C G T
A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G