Information for 3-AACCGAGGCTTGGCCB (Motif 4)

C G T A C G T A A T G C T G A C A C T G C G T A C T A G A T C G A G T C A C G T A G C T A T C G A C T G A G T C A T G C A C G T
Reverse Opposite:
T A C G A T C G A C T G A G T C A T G C C T G A G T C A A C T G A T G C A G T C A C G T A G T C A C T G A T C G A C G T C G A T
p-value:1e-13
log p-value:-3.169e+01
Information Content per bp:1.771
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.5 +/- 26.7bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AACCGAGGCTTGGCCB-
--CAAAGGCGTGGCCAG
 C G T A C G T A A T G C T G A C A C T G C G T A C T A G A T C G A G T C A C G T A G C T A T C G A C T G A G T C A T G C A C G T A C G T
A C G T A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AACCGAGGCTTGGCCB-
---GGGGCCGAGGCCTG
 C G T A C G T A A T G C T G A C A C T G C G T A C T A G A T C G A G T C A C G T A G C T A T C G A C T G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AACCGAGGCTTGGCCB
---GGGGGCGGGGCC-
 C G T A C G T A A T G C T G A C A C T G C G T A C T A G A T C G A G T C A C G T A G C T A T C G A C T G A G T C A T G C A C G T
A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AACCGAGGCTTGGCCB
SCAGYCADGCATGAC--
 A C G T C G T A C G T A A T G C T G A C A C T G C G T A C T A G A T C G A G T C A C G T A G C T A T C G A C T G A G T C A T G C A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AACCGAGGCTTGGCCB
GCAGCCAAGCGTGACN-
 A C G T C G T A C G T A A T G C T G A C A C T G C G T A C T A G A T C G A G T C A C G T A G C T A T C G A C T G A G T C A T G C A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C A C G T

KLF13/MA0657.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AACCGAGGCTTGGCCB
CAAAAAGGGGCGTGGCAT
 A C G T A C G T C G T A C G T A A T G C T G A C A C T G C G T A C T A G A T C G A G T C A C G T A G C T A T C G A C T G A G T C A T G C A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AACCGAGGCTTGGCCB
----GAGSCCGAGC--
 C G T A C G T A A T G C T G A C A C T G C G T A C T A G A T C G A G T C A C G T A G C T A T C G A C T G A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----AACCGAGGCTTGGCCB
TCGAAACCGAAACT------
 A C G T A C G T A C G T A C G T C G T A C G T A A T G C T G A C A C T G C G T A C T A G A T C G A G T C A C G T A G C T A T C G A C T G A G T C A T G C A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:AACCGAGGCTTGGCCB
-----AAGCTTG----
 C G T A C G T A A T G C T G A C A C T G C G T A C T A G A T C G A G T C A C G T A G C T A T C G A C T G A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:AACCGAGGCTTGGCCB
--------CTAGGCCT
 C G T A C G T A A T G C T G A C A C T G C G T A C T A G A T C G A G T C A C G T A G C T A T C G A C T G A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T