Information for 12-GAGCAGGTGC (Motif 19)

A C T G C T G A A C T G A G T C C G T A A T C G A C T G A G C T A C T G A T G C
Reverse Opposite:
A T C G A G T C C T G A A G T C A T G C A C G T C T A G A G T C A G C T A G T C
p-value:1e-8
log p-value:-1.957e+01
Information Content per bp:1.911
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif182.8
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets51.2 +/- 27.9bp
Average Position of motif in Background49.3 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:GAGCAGGTGC--
SDGCAGGTGCNS
 A C T G C T G A A C T G A G T C C G T A A T C G A C T G A G C T A C T G A T G C A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.81
Offset:1
Orientation:forward strand
Alignment:GAGCAGGTGC
-AACAGGTGT
 A C T G C T G A A C T G A G T C C G T A A T C G A C T G A G C T A C T G A T G C
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

TCF4/MA0830.1/Jaspar

Match Rank:3
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GAGCAGGTGC-
-NNCAGGTGCG
 A C T G C T G A A C T G A G T C C G T A A T C G A C T G A G C T A C T G A T G C A C G T
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GAGCAGGTGC-
-NNCAGGTGTN
 A C T G C T G A A C T G A G T C C G T A A T C G A C T G A G C T A C T G A T G C A C G T
A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GAGCAGGTGC-
-NNCAGGTGNN
 A C T G C T G A A C T G A G T C C G T A A T C G A C T G A G C T A C T G A T G C A C G T
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ID4/MA0824.1/Jaspar

Match Rank:6
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GAGCAGGTGC-
-GACAGGTGTN
 A C T G C T G A A C T G A G T C C G T A A T C G A C T G A G C T A C T G A T G C A C G T
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:7
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GAGCAGGTGC-----
ATCCACAGGTGCGAAAA
 A C G T A C G T A C T G C T G A A C T G A G T C C G T A A T C G A C T G A G C T A C T G A T G C A C G T A C G T A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GAGCAGGTGC----
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C T G C T G A A C T G A G T C C G T A A T C G A C T G A G C T A C T G A T G C A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GAGCAGGTGC-
-CGCAGCTGCG
 A C T G C T G A A C T G A G T C C G T A A T C G A C T G A G C T A C T G A T G C A C G T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GAGCAGGTGC-
NGNGACAGCTGCN
 A C G T A C G T A C T G C T G A A C T G A G T C C G T A A T C G A C T G A G C T A C T G A T G C A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A