Information for 7-AAGATTAAAA (Motif 7)

T C G A G T C A T A C G T G C A A G C T A C G T T G C A C G T A C G T A T C G A
Reverse Opposite:
A G C T G C A T G C A T A C G T T G C A T C G A A C G T A T G C C A G T A G C T
p-value:1e-10
log p-value:-2.517e+01
Information Content per bp:1.663
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.43%
Number of Background Sequences with motif554.1
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets52.4 +/- 28.9bp
Average Position of motif in Background49.9 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.76
Offset:3
Orientation:forward strand
Alignment:AAGATTAAAA
---ATTAAA-
 T C G A G T C A T A C G T G C A A G C T A C G T T G C A C G T A C G T A T C G A
A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T

OTX2/MA0712.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AAGATTAAAA
NGGATTAA--
 T C G A G T C A T A C G T G C A A G C T A C G T T G C A C G T A C G T A T C G A
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAGATTAAAA
RGGATTAR--
 T C G A G T C A T A C G T G C A A G C T A C G T T G C A C G T A C G T A T C G A
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAGATTAAAA-
NTAATTAATAT
 T C G A G T C A T A C G T G C A A G C T A C G T T G C A C G T A C G T A T C G A A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAGATTAAAA
CGGTTTCAAA
 T C G A G T C A T A C G T G C A A G C T A C G T T G C A C G T A C G T A T C G A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AAGATTAAAA
VRGGATTARN-
 A C G T T C G A G T C A T A C G T G C A A G C T A C G T T G C A C G T A C G T A T C G A
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AAGATTAAAA-
--NATTCAAAT
 T C G A G T C A T A C G T G C A A G C T A C G T T G C A C G T A C G T A T C G A A C G T
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAGATTAAAA
GGGATTAA--
 T C G A G T C A T A C G T G C A A G C T A C G T T G C A C G T A C G T A T C G A
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAGATTAAAA-----
TAAGATTATAATACGG
 A C G T T C G A G T C A T A C G T G C A A G C T A C G T T G C A C G T A C G T A T C G A A C G T A C G T A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAGATTAAAA-
AAAGATCAAAGG
 A C G T T C G A G T C A T A C G T G C A A G C T A C G T T G C A C G T A C G T A T C G A A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G