Information for 5-GAATCTTSCAGAA (Motif 2)

A C T G G T C A C G T A A G C T A G T C A G C T A C G T A T G C A G T C C G T A C T A G C T G A C G T A
Reverse Opposite:
C G A T A G C T A G T C G A C T C T A G A T C G C G T A C T G A C T A G C T G A A C G T A C G T A G T C
p-value:1e-23
log p-value:-5.378e+01
Information Content per bp:1.833
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.9 +/- 27.2bp
Average Position of motif in Background31.8 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HSF4/MA0771.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GAATCTTSCAGAA
GAANNTTCTAGAA
 A C T G G T C A C G T A A G C T A G T C A G C T A C G T A T G C A G T C C G T A C T A G C T G A C G T A
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GAATCTTSCAGAA
TAGAANVTTCTAGAA
 A C G T A C G T A C T G G T C A C G T A A G C T A G T C A G C T A C G T A T G C A G T C C G T A C T A G C T G A C G T A
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

HSF1/MA0486.2/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GAATCTTSCAGAA
GAACGTTCTAGAA
 A C T G G T C A C G T A A G C T A G T C A G C T A C G T A T G C A G T C C G T A C T A G C T G A C G T A
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

HSF2/MA0770.1/Jaspar

Match Rank:4
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GAATCTTSCAGAA
GAANGTTCTAGAA
 A C T G G T C A C G T A A G C T A G T C A G C T A C G T A T G C A G T C C G T A C T A G C T G A C G T A
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----GAATCTTSCAGAA--
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G T A A G C T A G T C A G C T A C G T A T G C A G T C C G T A C T A G C T G A C G T A A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GAATCTTSCAGAA
---TTTTCCA---
 A C T G G T C A C G T A A G C T A G T C A G C T A C G T A T G C A G T C C G T A C T A G C T G A C G T A
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAATCTTSCAGAA
CTAATATTGCTAAA
 A C G T A C T G G T C A C G T A A G C T A G T C A G C T A C G T A T G C A G T C C G T A C T A G C T G A C G T A
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAATCTTSCAGAA
CTAATATTGCTAAA
 A C G T A C T G G T C A C G T A A G C T A G T C A G C T A C G T A T G C A G T C C G T A C T A G C T G A C G T A
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAATCTTSCAGAA
NTGGAATGTN------
 A C G T A C G T A C G T A C T G G T C A C G T A A G C T A G T C A G C T A C G T A T G C A G T C C G T A C T A G C T G A C G T A
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAATCTTSCAGAA
-AAGCTTG-----
 A C T G G T C A C G T A A G C T A G T C A G C T A C G T A T G C A G T C C G T A C T A G C T G A C G T A
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T