Information for 7-TCAGTCATTA (Motif 7)

A C G T A T G C C G T A A C T G A C G T G T A C G T C A A G C T C G A T C T G A
Reverse Opposite:
A G C T C G T A C T G A C A G T A C T G G T C A A G T C C G A T A T C G G T C A
p-value:1e-11
log p-value:-2.594e+01
Information Content per bp:1.844
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif74.4
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets46.9 +/- 29.1bp
Average Position of motif in Background51.8 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BATF::JUN/MA0462.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TCAGTCATTA-
TGAGTCATTTC
 A C G T A T G C C G T A A C T G A C G T G T A C G T C A A G C T C G A T C T G A A C G T
C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

MEOX2/MA0706.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TCAGTCATTA--
--AGTAATTAAC
 A C G T A T G C C G T A A C T G A C G T G T A C G T C A A G C T C G A T C T G A A C G T A C G T
A C G T A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

PH0073.1_Hoxc9/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TCAGTCATTA-----
GGAGGTCATTAATTAT
 A C G T A C G T A T G C C G T A A C T G A C G T G T A C G T C A A G C T C G A T C T G A A C G T A C G T A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

JDP2/MA0655.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TCAGTCATTA
ATGAGTCAT--
 A C G T A C G T A T G C C G T A A C T G A C G T G T A C G T C A A G C T C G A T C T G A
C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TCAGTCATTA--
--ACTAATTAGC
 A C G T A T G C C G T A A C T G A C G T G T A C G T C A A G C T C G A T C T G A A C G T A C G T
A C G T A C G T C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C

EMX1/MA0612.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCAGTCATTA--
--NNTAATTAGN
 A C G T A T G C C G T A A C T G A C G T G T A C G T C A A G C T C G A T C T G A A C G T A C G T
A C G T A C G T T C A G A T C G G A C T G T C A G C T A G C A T A G C T C T G A C T A G A C T G

NFE2/MA0841.1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCAGTCATTA
GATGAGTCATN-
 A C G T A C G T A C G T A T G C C G T A A C T G A C G T G T A C G T C A A G C T C G A T C T G A
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T

HOXB2/MA0902.1/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TCAGTCATTA--
--AGTAATTAAC
 A C G T A T G C C G T A A C T G A C G T G T A C G T C A A G C T C G A T C T G A A C G T A C G T
A C G T A C G T T C G A T A C G G A C T T G C A T C G A A C G T G A C T G C T A T C G A T G A C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:9
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TCAGTCATTA--
----YCATTAMC
 A C G T A T G C C G T A A C T G A C G T G T A C G T C A A G C T C G A T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

NKX6-1/MA0674.1/Jaspar

Match Rank:10
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TCAGTCATTA-
---GTAATTAA
 A C G T A T G C C G T A A C T G A C G T G T A C G T C A A G C T C G A T C T G A A C G T
A C G T A C G T A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A