Information for 9-GAGAAGGCGTGGC (Motif 9)

A T C G C T G A A C T G C G T A C T G A A C T G C T A G G A T C C T A G A C G T A T C G A C T G A T G C
Reverse Opposite:
A T C G A G T C A T G C G T C A A G T C C T A G A G T C A G T C G A C T A C G T A G T C A G C T A T G C
p-value:1e-13
log p-value:-3.047e+01
Information Content per bp:1.825
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.8 +/- 21.9bp
Average Position of motif in Background70.5 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GAGAAGGCGTGGC---
-CAAAGGCGTGGCCAG
 A T C G C T G A A C T G C G T A C T G A A C T G C T A G G A T C C T A G A C G T A T C G A C T G A T G C A C G T A C G T A C G T
A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GAGAAGGCGTGGC
-RGTGGGYGTGGC
 A T C G C T G A A C T G C G T A C T G A A C T G C T A G G A T C C T A G A C G T A T C G A C T G A T G C
A C G T C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C

SP4/MA0685.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAGAAGGCGTGGC---
NAAGGGGGCGTGGCTTN
 A C G T A T C G C T G A A C T G C G T A C T G A A C T G C T A G G A T C C T A G A C G T A T C G A C T G A T G C A C G T A C G T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAGAAGGCGTGGC
---DGGGYGKGGC
 A T C G C T G A A C T G C G T A C T G A A C T G C T A G G A T C C T A G A C G T A T C G A C T G A T G C
A C G T A C G T A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGAAGGCGTGGC
-NGAAGC------
 A T C G C T G A A C T G C G T A C T G A A C T G C T A G G A T C C T A G A C G T A T C G A C T G A T G C
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

SP8/MA0747.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGAAGGCGTGGC
-AGTGGGCGTGGC
 A T C G C T G A A C T G C G T A C T G A A C T G C T A G G A T C C T A G A C G T A T C G A C T G A T G C
A C G T C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C

CREB3L1/MA0839.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGAAGGCGTGGC--
-TGATGACGTGGCAN
 A T C G C T G A A C T G C G T A C T G A A C T G C T A G G A T C C T A G A C G T A T C G A C T G A T G C A C G T A C G T
A C G T G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGAAGGCGTGGC--
NNVDGGGYGGGGCYN
 A T C G C T G A A C T G C G T A C T G A A C T G C T A G G A T C C T A G A C G T A T C G A C T G A T G C A C G T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGAAGGCGTGGC--
-AGGGGGCGGGGCTG
 A T C G C T G A A C T G C G T A C T G A A C T G C T A G G A T C C T A G A C G T A T C G A C T G A T G C A C G T A C G T
A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGAAGGCGTGGC
-RGKGGGCGKGGC
 A T C G C T G A A C T G C G T A C T G A A C T G C T A G G A T C C T A G A C G T A T C G A C T G A T G C
A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C