Information for 21-CTTCWCCRGRCTC (Motif 28)

A G T C A C G T A C G T A G T C C G T A A T G C A G T C C T A G A C T G C T G A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G C T A G T C G A C T A C T G A T C G C G A T A C T G C G T A C G T A A C T G
p-value:1e-7
log p-value:-1.680e+01
Information Content per bp:1.887
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.0 +/- 16.4bp
Average Position of motif in Background48.4 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTCWCCRGRCTC
GCTTCC--------
 A C G T A G T C A C G T A C G T A G T C C G T A A T G C A G T C C T A G A C T G C T G A A G T C A C G T A G T C
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTTCWCCRGRCTC-------
---TACGAGACTCCTCTAAC
 A G T C A C G T A C G T A G T C C G T A A T G C A G T C C T A G A C T G C T G A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTTCWCCRGRCTC-
NNCNTGACCCCGCTCT
 A C G T A C G T A G T C A C G T A C G T A G T C C G T A A T G C A G T C C T A G A C T G C T G A A G T C A C G T A G T C A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTTCWCCRGRCTC
KGCCCTTCCCCA-----
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A A T G C A G T C C T A G A C T G C T G A A G T C A C G T A G T C
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTTCWCCRGRCTC
CCTCACCTG----
 A G T C A C G T A C G T A G T C C G T A A T G C A G T C C T A G A C T G C T G A A G T C A C G T A G T C
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTTCWCCRGRCTC
-TTCTNMGGAA--
 A G T C A C G T A C G T A G T C C G T A A T G C A G T C C T A G A C T G C T G A A G T C A C G T A G T C
A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTTCWCCRGRCTC
--TCCCCA-----
 A G T C A C G T A C G T A G T C C G T A A T G C A G T C C T A G A C T G C T G A A G T C A C G T A G T C
A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTTCWCCRGRCTC----
CAAATCCAGACATCACA
 A G T C A C G T A C G T A G T C C G T A A T G C A G T C C T A G A C T G C T G A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CTTCWCCRGRCTC
ANTTCTNNAGAA--
 A C G T A G T C A C G T A C G T A G T C C G T A A T G C A G T C C T A G A C T G C T G A A G T C A C G T A G T C
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CTTCWCCRGRCTC
-----CCAGACAG
 A G T C A C G T A C G T A G T C C G T A A T G C A G T C C T A G A C T G C T G A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G