Information for 18-TGACAATTGCCAA (Motif 24)

A C G T A C T G C T G A A T G C C G T A C G T A A C G T A C G T A C T G A G T C A G T C C G T A C T G A
Reverse Opposite:
A G C T A C G T A C T G C T A G A G T C C G T A C G T A C G A T C G A T A T C G A G C T A G T C G T C A
p-value:1e-9
log p-value:-2.124e+01
Information Content per bp:1.863
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.5 +/- 16.9bp
Average Position of motif in Background55.5 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.69
Offset:6
Orientation:forward strand
Alignment:TGACAATTGCCAA-
------TTGCCAAG
 A C G T A C T G C T G A A T G C C G T A C G T A A C G T A C G T A C T G A G T C A G T C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

TGIF2/MA0797.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGACAATTGCCAA
TGACAGCTGTCA-
 A C G T A C T G C T G A A T G C C G T A C G T A A C G T A C G T A C T G A G T C A G T C C G T A C T G A
G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGACAATTGCCAA
TGACAGGTGTCA-
 A C G T A C T G C T G A A T G C C G T A C G T A A C G T A C G T A C T G A G T C A G T C C G T A C T G A
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGACAATTGCCAA
TGACACCTGTCA-
 A C G T A C T G C T G A A T G C C G T A C G T A A C G T A C G T A C T G A G T C A G T C C G T A C T G A
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGACAATTGCCAA
TGACAGCTGTCA-
 A C G T A C T G C T G A A T G C C G T A C G T A A C G T A C G T A C T G A G T C A G T C C G T A C T G A
G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TGACAATTGCCAA--
-----GGTGCCAAGT
 A C G T A C T G C T G A A T G C C G T A C G T A A C G T A C G T A C T G A G T C A G T C C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TGACAATTGCCAA-
-----CGTGCCAAG
 A C G T A C T G C T G A A T G C C G T A C G T A A C G T A C G T A C T G A G T C A G T C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:TGACAATTGCCAA
-------TGCCAA
 A C G T A C T G C T G A A T G C C G T A C G T A A C G T A C G T A C T G A G T C A G T C C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TGACAATTGCCAA-
------YTGWCADY
 A C G T A C T G C T G A A T G C C G T A C G T A A C G T A C G T A C T G A G T C A G T C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.60
Offset:7
Orientation:forward strand
Alignment:TGACAATTGCCAA--
-------TGTCANYT
 A C G T A C T G C T G A A T G C C G T A C G T A A C G T A C G T A C T G A G T C A G T C C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T