Information for 12-TTATTTGCAT (Motif 17)

G A C T G C A T G C T A G A C T A C G T C A G T T C A G A T G C G C T A C G A T
Reverse Opposite:
G C T A C G A T T A C G A G T C G T C A T G C A C T G A C G A T C G T A C T G A
p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.665
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.46%
Number of Background Sequences with motif1018.2
Percentage of Background Sequences with motif2.24%
Average Position of motif in Targets53.0 +/- 28.8bp
Average Position of motif in Background49.0 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-TTATTTGCAT--
TTCATTTGCATAT
 A C G T G A C T G C A T G C T A G A C T A C G T C A G T T C A G A T G C G C T A C G A T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

PH0144.1_Pou2f2/Jaspar

Match Rank:2
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--TTATTTGCAT----
TNTAATTTGCATANNN
 A C G T A C G T G A C T G C A T G C T A G A C T A C G T C A G T T C A G A T G C G C T A C G A T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-TTATTTGCAT-
CTCATTTGCATW
 A C G T G A C T G C A T G C T A G A C T A C G T C A G T T C A G A T G C G C T A C G A T A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.88
Offset:2
Orientation:forward strand
Alignment:TTATTTGCAT--
--ATTTGCATAA
 G A C T G C A T G C T A G A C T A C G T C A G T T C A G A T G C G C T A C G A T A C G T A C G T
A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--TTATTTGCAT----
TNTAATTTGCATACNA
 A C G T A C G T G A C T G C A T G C T A G A C T A C G T C A G T T C A G A T G C G C T A C G A T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--TTATTTGCAT----
TNTAATTTGCATACNA
 A C G T A C G T G A C T G C A T G C T A G A C T A C G T C A G T T C A G A T G C G C T A C G A T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-TTATTTGCAT-
BTVATTWGCATA
 A C G T G A C T G C A T G C T A G A C T A C G T C A G T T C A G A T G C G C T A C G A T A C G T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:TTATTTGCAT--
--ATTTGCATAT
 G A C T G C A T G C T A G A C T A C G T C A G T T C A G A T G C G C T A C G A T A C G T A C G T
A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

POU5F1B/MA0792.1/Jaspar

Match Rank:9
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:TTATTTGCAT-
--ATTTGCATA
 G A C T G C A T G C T A G A C T A C G T C A G T T C A G A T G C G C T A C G A T A C G T
A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

POU1F1/MA0784.1/Jaspar

Match Rank:10
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-TTATTTGCAT---
CTAATTTGCATATT
 A C G T G A C T G C A T G C T A G A C T A C G T C A G T T C A G A T G C G C T A C G A T A C G T A C G T A C G T
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T