Information for 10-TCATATTATA (Motif 14)

A C G T A T G C C G T A C G A T C T G A A C G T C G A T C G T A A C G T C G T A
Reverse Opposite:
C G A T G T C A A C G T C G T A C G T A G A C T C G T A C G A T A T C G C G T A
p-value:1e-11
log p-value:-2.699e+01
Information Content per bp:1.855
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.6 +/- 29.3bp
Average Position of motif in Background52.2 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TCATATTATA------
TAAGATTATAATACGG
 A C G T A T G C C G T A C G A T C T G A A C G T C G A T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCATATTATA------
NANTATTATAATTNNN
 A C G T A T G C C G T A C G A T C T G A A C G T C G A T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCATATTATA-----
CCGTATTATAAACAA
 A C G T A T G C C G T A C G A T C T G A A C G T C G A T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCATATTATA------
NNTAATTATAATTNNN
 A C G T A T G C C G T A C G A T C T G A A C G T C G A T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0069.1_Sox21_1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCATATTATA------
NNTAATTATAATNANN
 A C G T A T G C C G T A C G A T C T G A A C G T C G A T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCATATTATA
GKVTCADRTTWC-
 A C G T A C G T A C G T A C G T A T G C C G T A C G A T C T G A A C G T C G A T C G T A A C G T C G T A
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TCATATTATA--
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G A T C T G A A C G T C G A T C G T A A C G T C G T A A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCATATTATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G A T C T G A A C G T C G A T C G T A A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCATATTATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G A T C T G A A C G T C G A T C G T A A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

Arid5a/MA0602.1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TCATATTATA
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G A T C T G A A C G T C G A T C G T A A C G T C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T