Information for 5-TGCAGVDCACAGGVTG (Motif 10)

A C G T A T C G G T A C C G T A A C T G T C G A C A T G A T G C T C G A A G T C C G T A A C T G C T A G T A C G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G T C A G T C A C G T A C T G A C G T A T C G G A T C A C G T G T A C A C G T A C T G A T G C C G T A
p-value:1e-13
log p-value:-3.047e+01
Information Content per bp:1.818
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.5 +/- 17.2bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TGCAGVDCACAGGVTG
-------CACAGN---
 A C G T A T C G G T A C C G T A A C T G T C G A C A T G A T G C T C G A A G T C C G T A A C T G C T A G T A C G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.59
Offset:7
Orientation:forward strand
Alignment:TGCAGVDCACAGGVTG-
-------AACAGGAAGT
 A C G T A T C G G T A C C G T A A C T G T C G A C A T G A T G C T C G A A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGCAGVDCACAGGVTG---
----GAGCACAGCAGGACA
 A C G T A T C G G T A C C G T A A C T G T C G A C A T G A T G C T C G A A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGCAGVDCACAGGVTG-----
-----AGNACAGNCTGTTCTN
 A C G T A T C G G T A C C G T A A C T G T C G A C A T G A T G C T C G A A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TGCAGVDCACAGGVTG-----
------GVACAGNMTGTYCTB
 A C G T A T C G G T A C C G T A A C T G T C G A C A T G A T G C T C G A A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TGCAGVDCACAGGVTG
------DCTCAGCAGG
 A C G T A T C G G T A C C G T A A C T G T C G A C A T G A T G C T C G A A G T C C G T A A C T G C T A G T A C G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TGCAGVDCACAGGVTG-----
-----AGNACANNNTGTNCTN
 A C G T A T C G G T A C C G T A A C T G T C G A C A T G A T G C T C G A A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TGCAGVDCACAGGVTG---
----CCACACAGCAGGAGA
 A C G T A T C G G T A C C G T A A C T G T C G A C A T G A T G C T C G A A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.51
Offset:8
Orientation:forward strand
Alignment:TGCAGVDCACAGGVTG--
--------ACAGGAAGTG
 A C G T A T C G G T A C C G T A A C T G T C G A C A T G A T G C T C G A A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.51
Offset:8
Orientation:forward strand
Alignment:TGCAGVDCACAGGVTG--
--------ACAGGAAGTG
 A C G T A T C G G T A C C G T A A C T G T C G A C A T G A T G C T C G A A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G