Information for 8-GGAGGTTGGAGAAABH (Motif 8)

C A T G A T C G C T G A A C T G A C T G A G C T A C G T A C T G T A C G C G T A A C T G C G T A C T G A G T C A A T G C G T A C
Reverse Opposite:
C A T G T A C G A C G T A G C T A C G T A G T C A C G T A T G C A G T C G T C A C T G A A G T C A G T C G A C T A T G C G T A C
p-value:1e-13
log p-value:-3.037e+01
Information Content per bp:1.776
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets50.5 +/- 25.5bp
Average Position of motif in Background42.2 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGAGGTTGGAGAAABH
--AGGTGNCAGACAG-
 C A T G A T C G C T G A A C T G A C T G A G C T A C G T A C T G T A C G C G T A A C T G C G T A C T G A G T C A A T G C G T A C
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGAGGTTGGAGAAABH
--GGGCGGGAAGG---
 C A T G A T C G C T G A A C T G A C T G A G C T A C G T A C T G T A C G C G T A A C T G C G T A C T G A G T C A A T G C G T A C
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGAGGTTGGAGAAABH
--AGGTGHCAGACA--
 C A T G A T C G C T G A A C T G A C T G A G C T A C G T A C T G T A C G C G T A A C T G C G T A C T G A G T C A A T G C G T A C
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGAGGTTGGAGAAABH-
--CAATTGCAAAAATAT
 C A T G A T C G C T G A A C T G A C T G A G C T A C G T A C T G T A C G C G T A A C T G C G T A C T G A G T C A A T G C G T A C A C G T
A C G T A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGAGGTTGGAGAAABH
--GGGCGGGAAGG---
 C A T G A T C G C T G A A C T G A C T G A G C T A C G T A C T G T A C G C G T A A C T G C G T A C T G A G T C A A T G C G T A C
A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GGAGGTTGGAGAAABH
------TGGAAAA---
 C A T G A T C G C T G A A C T G A C T G A G C T A C G T A C T G T A C G C G T A A C T G C G T A C T G A G T C A A T G C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGAGGTTGGAGAAABH
---GGCGGGAARN---
 C A T G A T C G C T G A A C T G A C T G A G C T A C G T A C T G T A C G C G T A A C T G C G T A C T G A G T C A A T G C G T A C
A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGAGGTTGGAGAAABH
GGGNGGGGGCGGGGC-----
 A C G T A C G T A C G T A C G T C A T G A T C G C T G A A C T G A C T G A G C T A C G T A C T G T A C G C G T A A C T G C G T A C T G A G T C A A T G C G T A C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGAGGTTGGAGAAABH
GGGGGGGGGGGGGGA----
 A C G T A C G T A C G T C A T G A T C G C T G A A C T G A C T G A G C T A C G T A C T G T A C G C G T A A C T G C G T A C T G A G T C A A T G C G T A C
A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGAGGTTGGAGAAABH
GGCGGGGGCGGGGG-----
 A C G T A C G T A C G T C A T G A T C G C T G A A C T G A C T G A G C T A C G T A C T G T A C G C G T A A C T G C G T A C T G A G T C A A T G C G T A C
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T A C G T A C G T A C G T A C G T