Information for 6-TGTGGAGTACTTC (Motif 4)

C A G T A C T G A C G T A C T G T A C G C G T A A C T G G A C T C G T A G T A C A C G T C G A T A T G C
Reverse Opposite:
T A C G C G T A C G T A A C T G A C G T C T G A A G T C C G A T A T G C A G T C G T C A A G T C G T C A
p-value:1e-14
log p-value:-3.392e+01
Information Content per bp:1.811
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.4 +/- 20.5bp
Average Position of motif in Background71.6 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGTGGAGTACTTC----
TTCNAAGTACTTNNNNN
 C A G T A C T G A C G T A C T G T A C G C G T A A C T G G A C T C G T A G T A C A C G T C G A T A T G C A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PH0116.1_Nkx2-9/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGAGTACTTC---
NATTTAAGTACTTNAAA
 A C G T C A G T A C T G A C G T A C T G T A C G C G T A A C T G G A C T C G T A G T A C A C G T C G A T A T G C A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0117.1_Nkx3-1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGAGTACTTC---
NATTTAAGTACTTANNA
 A C G T C A G T A C T G A C G T A C T G T A C G C G T A A C T G G A C T C G T A G T A C A C G T C G A T A T G C A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGTGGAGTACTTC---
CTTTAAGTACTTAATG
 C A G T A C T G A C G T A C T G T A C G C G T A A C T G G A C T C G T A G T A C A C G T C G A T A T G C A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGTGGAGTACTTC
-GTGGAT------
 C A G T A C T G A C G T A C T G T A C G C G T A A C T G G A C T C G T A G T A C A C G T C G A T A T G C
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGTGGAGTACTTC-
----AAGCACTTAA
 C A G T A C T G A C G T A C T G T A C G C G T A A C T G G A C T C G T A G T A C A C G T C G A T A T G C A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGTGGAGTACTTC
--GGGAGGACNG-
 C A G T A C T G A C G T A C T G T A C G C G T A A C T G G A C T C G T A G T A C A C G T C G A T A T G C
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGAGTACTTC---
NNNNTGAGCACTGTNNG
 A C G T C A G T A C T G A C G T A C T G T A C G C G T A A C T G G A C T C G T A G T A C A C G T C G A T A T G C A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGTGGAGTACTTC
NNTGTGGATTSS---
 A C G T A C G T C A G T A C T G A C G T A C T G T A C G C G T A A C T G G A C T C G T A G T A C A C G T C G A T A T G C
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TGTGGAGTACTTC--
------CCACTTGAA
 C A G T A C T G A C G T A C T G T A C G C G T A A C T G G A C T C G T A G T A C A C G T C G A T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A