Information for 16-AGCCACCCAG (Motif 34)

C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C T G
Reverse Opposite:
A G T C A G C T A C T G A C T G A C T G A C G T A C T G A C T G A G T C A C G T
p-value:1e-6
log p-value:-1.589e+01
Information Content per bp:1.964
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.8 +/- 26.8bp
Average Position of motif in Background47.5 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----AGCCACCCAG---
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C T G A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGCCACCCAG-
GGACCACCCACG
 A C G T C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C T G A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGCCACCCAG-
AGCCACTCAAG
 C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C T G A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGCCACCCAG--
ACTATGCCAACCTACC
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C T G A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGCCACCCAG
ATCCAC----
 C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C T G
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCCACCCAG
ATGCCAACC--
 A C G T C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C T G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCCACCCAG
ACTAGCCAATCA-
 A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCCACCCAG
CAGCC------
 A C G T C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGCCACCCAG---
-YCCGCCCACGCN
 C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C T G A C G T A C G T A C G T
A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGCCACCCAG
---CACGCA-
 C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C T G
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T