Information for 3-AGGTGGTGCTGTG (Motif 3)

T C G A A C T G A T C G G C A T A C T G A C T G A G C T C T A G A G T C A C G T T A C G A C G T A C T G
Reverse Opposite:
A G T C C G T A A T G C C G T A T A C G A G T C C T G A G T A C G T A C C G T A A T G C A G T C A G C T
p-value:1e-18
log p-value:-4.259e+01
Information Content per bp:1.780
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets56.4 +/- 24.7bp
Average Position of motif in Background35.6 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)2.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGGTGGTGCTGTG
GCGGAGGTGTCGCCTC-
 A C G T A C G T A C G T A C G T T C G A A C T G A T C G G C A T A C T G A C T G A G C T C T A G A G T C A C G T T A C G A C G T A C T G
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGGTGGTGCTGTG--
AGATGCTRCTRCCHT
 T C G A A C T G A T C G G C A T A C T G A C T G A G C T C T A G A G T C A C G T T A C G A C G T A C T G A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

FIGLA/MA0820.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGGTGCTGTG
AACAGGTGNT------
 A C G T A C G T A C G T T C G A A C T G A T C G G C A T A C T G A C T G A G C T C T A G A G T C A C G T T A C G A C G T A C T G
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGGTGGTGCTGTG
AGGGGGCGGGGCTG--
 A C G T A C G T A C G T T C G A A C T G A T C G G C A T A C T G A C T G A G C T C T A G A G T C A C G T T A C G A C G T A C T G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGGTGCTGTG
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A C G T T C G A A C T G A T C G G C A T A C T G A C T G A G C T C T A G A G T C A C G T T A C G A C G T A C T G
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGGTGCTGTG
NNCAGGTGNN------
 A C G T A C G T A C G T T C G A A C T G A T C G G C A T A C T G A C T G A G C T C T A G A G T C A C G T T A C G A C G T A C T G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGGTGCTGTG---
NGGGGGGGGGTGGTTTGGGG
 A C G T A C G T A C G T A C G T T C G A A C T G A T C G G C A T A C T G A C T G A G C T C T A G A G T C A C G T T A C G A C G T A C T G A C G T A C G T A C G T
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGGTGGTGCTGTG----
--GTNTTGTTGTGANNT
 T C G A A C T G A T C G G C A T A C T G A C T G A G C T C T A G A G T C A C G T T A C G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGGTGCTGTG
NNCAGGTGTN------
 A C G T A C G T A C G T T C G A A C T G A T C G G C A T A C T G A C T G A G C T C T A G A G T C A C G T T A C G A C G T A C T G
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGGTGGTGCTGTG-
--CTGTTGCTAGGS
 T C G A A C T G A T C G G C A T A C T G A C T G A G C T C T A G A G T C A C G T T A C G A C G T A C T G A C G T
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G