Information for 12-CTYTGGSAGCTKSKSC (Motif 25)

A G T C C G A T A G C T A C G T A C T G T A C G A T G C C G T A A C T G A G T C A C G T A C G T A T G C A C G T A T G C A G T C
Reverse Opposite:
A C T G A T C G T G C A A T C G G T C A C G T A A C T G A G T C A C G T A T C G A G T C A G T C C G T A C T G A C G T A C T A G
p-value:1e-9
log p-value:-2.134e+01
Information Content per bp:1.839
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.7 +/- 20.5bp
Average Position of motif in Background70.3 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTYTGGSAGCTKSKSC--
-CTCAGCAGCTGCTACTG
 A G T C C G A T A G C T A C G T A C T G T A C G A T G C C G T A A C T G A G T C A C G T A C G T A T G C A C G T A T G C A G T C A C G T A C G T
A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTYTGGSAGCTKSKSC
----AGCAGCTGCTNN
 A G T C C G A T A G C T A C G T A C T G T A C G A T G C C G T A A C T G A G T C A C G T A C G T A T G C A C G T A T G C A G T C
A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTYTGGSAGCTKSKSC
----GACAGCTGCAG-
 A G T C C G A T A G C T A C G T A C T G T A C G A T G C C G T A A C T G A G T C A C G T A C G T A T G C A C G T A T G C A G T C
A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTYTGGSAGCTKSKSC
----AGCAGCTGCT--
 A G T C C G A T A G C T A C G T A C T G T A C G A T G C C G T A A C T G A G T C A C G T A C G T A T G C A C G T A T G C A G T C
A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTYTGGSAGCTKSKSC
GATATTGACAGCTGCGT-
 A C G T A C G T A G T C C G A T A G C T A C G T A C T G T A C G A T G C C G T A A C T G A G T C A C G T A C G T A T G C A C G T A T G C A G T C
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTYTGGSAGCTKSKSC
----CGCAGCTGCG--
 A G T C C G A T A G C T A C G T A C T G T A C G A T G C C G T A A C T G A G T C A C G T A C G T A T G C A C G T A T G C A G T C
A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTYTGGSAGCTKSKSC
GTATTGACAGCTNNTT-
 A C G T A G T C C G A T A G C T A C G T A C T G T A C G A T G C C G T A A C T G A G T C A C G T A C G T A T G C A C G T A T G C A G T C
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T A C G T

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTYTGGSAGCTKSKSC
---TGGCAGTTGN---
 A G T C C G A T A G C T A C G T A C T G T A C G A T G C C G T A A C T G A G T C A C G T A C G T A T G C A C G T A T G C A G T C
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CTYTGGSAGCTKSKSC
-----NCAGCTGCTG-
 A G T C C G A T A G C T A C G T A C T G T A C G A T G C C G T A A C T G A G T C A C G T A C G T A T G C A C G T A T G C A G T C
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTYTGGSAGCTKSKSC
----AACAGCTGCAG-
 A G T C C G A T A G C T A C G T A C T G T A C G A T G C C G T A A C T G A G T C A C G T A C G T A T G C A C G T A T G C A G T C
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T