Information for 6-AGCAAANCAG (Motif 14)

C G T A C T A G A T G C G T C A T G C A C T G A T C G A T A G C G T C A C A T G
Reverse Opposite:
G T A C C A G T A T C G A G C T G A C T A C G T C A G T T A C G G A T C G C A T
p-value:1e-12
log p-value:-2.801e+01
Information Content per bp:1.467
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.65%
Number of Background Sequences with motif53.7
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets40.8 +/- 29.7bp
Average Position of motif in Background56.5 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGCAAANCAG----
AACACCAAAACAAAGGA
 A C G T A C G T A C G T C G T A C T A G A T G C G T C A T G C A C T G A T C G A T A G C G T C A C A T G A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AGCAAANCAG
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A T G C G T C A T G C A C T G A T C G A T A G C G T C A C A T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGCAAANCAG
AGCCAATCGG
 C G T A C T A G A T G C G T C A T G C A C T G A T C G A T A G C G T C A C A T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGCAAANCAG--
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A T G C G T C A T G C A C T G A T C G A T A G C G T C A C A T G A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGCAAANCAG
ACTAGCCAATCA-
 A C G T A C G T A C G T C G T A C T A G A T G C G T C A T G C A C T G A T C G A T A G C G T C A C A T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

NFYA/MA0060.2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGCAAANCAG------
TGGACCAATCAGCACTCT
 A C G T A C G T C G T A C T A G A T G C G T C A T G C A C T G A T C G A T A G C G T C A C A T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AGCAAANCAG--
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A T G C G T C A T G C A C T G A T C G A T A G C G T C A C A T G A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGCAAANCAG-----
-GCAAAACATTACTA
 C G T A C T A G A T G C G T C A T G C A C T G A T C G A T A G C G T C A C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGCAAANCAG
AAAACAAAGG--
 A C G T A C G T C G T A C T A G A T G C G T C A T G C A C T G A T C G A T A G C G T C A C A T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGCAAANCAG
NACAGGAAAT---
 A C G T A C G T A C G T C G T A C T A G A T G C G T C A T G C A C T G A T C G A T A G C G T C A C A T G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T